Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_M24
         (593 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q229W5 Cluster: Putative uncharacterized protein; n=1; ...    35   1.7  
UniRef50_Q8I647 Cluster: Putative uncharacterized protein PFB097...    33   3.8  
UniRef50_Q4UFM9 Cluster: Putative uncharacterized protein; n=2; ...    33   5.0  
UniRef50_A6LZF1 Cluster: Putative uncharacterized protein; n=1; ...    32   8.8  
UniRef50_Q54QY9 Cluster: Putative non-transporter ABC protein; n...    32   8.8  

>UniRef50_Q229W5 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1169

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
 Frame = -2

Query: 244 RNFILFY*DNIRVYF---YIYAYIANYCLETNK---NAVYEFKSMGDG 119
           +NFIL + + IR  F   Y++ Y+    L+ N+   N VY+ KS+G+G
Sbjct: 796 KNFILHHINTIRTQFSEVYLFFYLKKLALQINQKFLNTVYKLKSLGEG 843


>UniRef50_Q8I647 Cluster: Putative uncharacterized protein PFB0976w;
           n=2; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFB0976w - Plasmodium falciparum
           (isolate 3D7)
          Length = 66

 Score = 33.5 bits (73), Expect = 3.8
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
 Frame = +1

Query: 52  NNYPFGKYFALF--SFYNFKY--NEICHHPCF*IHILHSYLFL 168
           +++P    F +F    Y F+Y  ++I HHP + IH+ HSY+FL
Sbjct: 23  SSFPMAFLFQIFFIDLYLFQYMDDDIYHHP-YHIHVYHSYVFL 64


>UniRef50_Q4UFM9 Cluster: Putative uncharacterized protein; n=2;
            Theileria|Rep: Putative uncharacterized protein -
            Theileria annulata
          Length = 1506

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 5/31 (16%)
 Frame = -3

Query: 513  NILKLQFTIPYFSI-----IVHSFITYFNDF 436
            NI KL++TIP+FSI     I+HSF+ Y +DF
Sbjct: 994  NIKKLKYTIPFFSIITVITIIHSFV-YLSDF 1023


>UniRef50_A6LZF1 Cluster: Putative uncharacterized protein; n=1;
           Clostridium beijerinckii NCIMB 8052|Rep: Putative
           uncharacterized protein - Clostridium beijerinckii NCIMB
           8052
          Length = 232

 Score = 32.3 bits (70), Expect = 8.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 220 DNIRVYFYIYAYIANYCLETNKNAVYEFK 134
           +NI   FY Y Y+  YCL   ++ + EFK
Sbjct: 46  NNINSIFYYYTYLDEYCLSIGEDDIKEFK 74


>UniRef50_Q54QY9 Cluster: Putative non-transporter ABC protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           non-transporter ABC protein - Dictyostelium discoideum
           AX4
          Length = 882

 Score = 32.3 bits (70), Expect = 8.8
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -1

Query: 341 ETAALRRFVDSQAVNISVFLTLMADINNVVRF*KFYFILLG*YKGIFLHIRLYCQLL 171
           E     + +D Q ++  ++ T + DIN V+R     F  LG +K I+ H +   +LL
Sbjct: 299 EVWVAHKVMDRQKIDNQLYRTTLLDINRVIRLGNRLFQSLGSFKNIYKHQKKVKKLL 355


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,599,786
Number of Sequences: 1657284
Number of extensions: 9848656
Number of successful extensions: 20201
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20138
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)