Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_M23
(504 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 25 0.45
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 25 0.59
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 24 0.78
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 5.5
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 21 7.3
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 7.3
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 7.3
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 7.3
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 7.3
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 7.3
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 7.3
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 7.3
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 7.3
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 25.0 bits (52), Expect = 0.45
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 277 VSTQYVYYTKKDSCRKLAGEQIP 209
V TQY YTK D+ + +++P
Sbjct: 1209 VITQYTVYTKADNAEEPTSQKVP 1231
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 24.6 bits (51), Expect = 0.59
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -1
Query: 336 IIIGKKYAHFMEFI*SNIVMSQRSMCITRRKIHAENWLG 220
+I+G ++ F NIV S CI+ R WLG
Sbjct: 276 VIMGVFLICWVPFFCVNIVTSYCKTCISGRAFQVLTWLG 314
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -2
Query: 155 VRSIRTVTKIP 123
V+SIR VTK+P
Sbjct: 223 VKSIRAVTKLP 233
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 24.2 bits (50), Expect = 0.78
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -2
Query: 251 EERFMQKIG--WGANTQTQGFEDQSSMKFQILNLVRSIRTVTKIPLIILNILT 99
+E+ +Q++ +G + + F+D MK+ L+ ++R +PLI I T
Sbjct: 371 QEKVIQELDEIFGDSDRPATFQDTLEMKYLERCLLETLRMYPPVPLIAREIKT 423
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 5.5
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = -1
Query: 147 N*NSYKDSSHHTQYPDNNVQTVTGIMNID 61
N N+Y +++++ Y +N + I+NI+
Sbjct: 334 NNNNYNNNNYNNNYNNNCKKLYYNIINIE 362
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 99 NNVQTVTGIMNIDIE 55
N QT TG+ +DIE
Sbjct: 42 NACQTQTGVATVDIE 56
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 88 NCYWDNEH*YRNINRKYKXLNS 23
+C D YR NR+Y+ L++
Sbjct: 3 SCSRDRNREYREKNRRYEKLHN 24
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 88 NCYWDNEH*YRNINRKYKXLNS 23
+C D YR NR+Y+ L++
Sbjct: 3 SCSRDRNREYREKNRRYEKLHN 24
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 88 NCYWDNEH*YRNINRKYKXLNS 23
+C D YR NR+Y+ L++
Sbjct: 3 SCSRDRNREYREKNRRYEKLHN 24
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 88 NCYWDNEH*YRNINRKYKXLNS 23
+C D YR NR+Y+ L++
Sbjct: 3 SCSRDRNREYREKNRRYEKLHN 24
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 88 NCYWDNEH*YRNINRKYKXLNS 23
+C D YR NR+Y+ L++
Sbjct: 3 SCSRDRNREYREKNRRYEKLHN 24
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 88 NCYWDNEH*YRNINRKYKXLNS 23
+C D YR NR+Y+ L++
Sbjct: 3 SCSRDRNREYREKNRRYEKLHN 24
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 88 NCYWDNEH*YRNINRKYKXLNS 23
+C D YR NR+Y+ L++
Sbjct: 3 SCSRDRNREYREKNRRYEKLHN 24
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1
Query: 280 NNVASNKFHKVSIFLSDYDLS 342
+ + + FH + +SDYD+S
Sbjct: 489 SELLGHAFHSQVLSMSDYDIS 509
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,573
Number of Sequences: 438
Number of extensions: 2598
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -