Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_M21
         (602 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens ...    40   0.007
AK128416-1|BAC87430.1|  303|Homo sapiens protein ( Homo sapiens ...    32   1.4  
AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens ...    31   4.1  

>AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42813 fis, clone BRCAN2012355. ).
          Length = 180

 Score = 39.9 bits (89), Expect = 0.007
 Identities = 19/85 (22%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
 Frame = -1

Query: 503 HISVLQHI*FCKKYNMKYYVVTNI*-CLYVST*FYINLFREDYICIETYVVIFENYCCIR 327
           H  +  HI  C    +  Y+ T+I  C++++   Y++++   Y CI+ Y+ ++  Y C  
Sbjct: 84  HTYMCAHIHMCVYTYIYVYIYTHIHICVHIN--MYVSIYVYIYTCIQIYIYMYTLYVCTY 141

Query: 326 IYSFFSRFLMLHSSLFKTTLFIRLE 252
            Y      + +H+S+    ++I ++
Sbjct: 142 TYMCTYIHICIHTSIIYVCVYIHIQ 166


>AK128416-1|BAC87430.1|  303|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46559 fis, clone THYMU3040126. ).
          Length = 303

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -1

Query: 428 CLYVST*FYINLFREDYICIETYVVIFEN-YCCIRIYSFFSRFLMLHSSLFKTT 270
           C+YV T  YI  +   Y+CI ++  I  + Y C+ I+     ++ +++ ++  T
Sbjct: 16  CIYVYTHTYIYTYTCMYVCIYSHTYIHTHVYVCVHIHICIHMYMCVYTHIYACT 69


>AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46861 fis, clone UTERU3011092. ).
          Length = 291

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -1

Query: 428 CLYVST*FYINLFREDYICIETYVVIFE-NYCCIRIYSFFSRFLMLH 291
           C+++ T  +  ++    ICI  YV I    Y CI IY+    ++ +H
Sbjct: 58  CIFICTHMHTYVYSYTRICIHMYVHIHAYAYICIFIYTHMHTYMYIH 104


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,957,739
Number of Sequences: 237096
Number of extensions: 1293598
Number of successful extensions: 1703
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1701
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)