Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_M21
(602 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY616149-1|AAT40462.1| 1070|Drosophila melanogaster NMDA recepto... 29 3.7
AY616148-1|AAT40461.1| 1083|Drosophila melanogaster NMDA recepto... 29 3.7
AY616147-1|AAT40460.1| 902|Drosophila melanogaster NMDA recepto... 29 3.7
AY616146-1|AAT40459.1| 902|Drosophila melanogaster NMDA recepto... 29 3.7
AY616145-1|AAT40458.1| 902|Drosophila melanogaster NMDA recepto... 29 3.7
AY616144-1|AAT40457.1| 902|Drosophila melanogaster NMDA recepto... 29 3.7
AY050491-1|AAL12479.1| 902|Drosophila melanogaster glutamate NM... 29 3.7
AY050490-1|AAL12478.1| 902|Drosophila melanogaster glutamate NM... 29 3.7
AL031027-9|CAA19838.1| 1012|Drosophila melanogaster EG:80H7.7 pr... 29 3.7
AF381249-1|AAM46167.1| 841|Drosophila melanogaster NMDA recepto... 29 3.7
AE014298-228|AAF45639.3| 902|Drosophila melanogaster CG33513-PB... 29 3.7
AE014298-227|AAN09051.2| 902|Drosophila melanogaster CG33513-PA... 29 3.7
AE014298-226|AAF45640.2| 1083|Drosophila melanogaster CG33513-PC... 29 3.7
>AY616149-1|AAT40462.1| 1070|Drosophila melanogaster NMDA receptor
subunit 2-3 protein.
Length = 1070
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 596 LYTDSYNNDFYKNSLMQTYWLLCRELF*IRIHI 498
LY + N Y+ SL +TYWL+ LF +H+
Sbjct: 695 LYLQNTNVTPYRFSLFRTYWLVWAVLFQAAVHV 727
>AY616148-1|AAT40461.1| 1083|Drosophila melanogaster NMDA receptor
subunit 2-2 protein.
Length = 1083
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 596 LYTDSYNNDFYKNSLMQTYWLLCRELF*IRIHI 498
LY + N Y+ SL +TYWL+ LF +H+
Sbjct: 695 LYLQNTNVTPYRFSLFRTYWLVWAVLFQAAVHV 727
>AY616147-1|AAT40460.1| 902|Drosophila melanogaster NMDA receptor
subunit 2-1f protein.
Length = 902
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 596 LYTDSYNNDFYKNSLMQTYWLLCRELF*IRIHI 498
LY + N Y+ SL +TYWL+ LF +H+
Sbjct: 514 LYLQNTNVTPYRFSLFRTYWLVWAVLFQAAVHV 546
>AY616146-1|AAT40459.1| 902|Drosophila melanogaster NMDA receptor
subunit 2-1e protein.
Length = 902
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 596 LYTDSYNNDFYKNSLMQTYWLLCRELF*IRIHI 498
LY + N Y+ SL +TYWL+ LF +H+
Sbjct: 514 LYLQNTNVTPYRFSLFRTYWLVWAVLFQAAVHV 546
>AY616145-1|AAT40458.1| 902|Drosophila melanogaster NMDA receptor
subunit 2-1d protein.
Length = 902
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 596 LYTDSYNNDFYKNSLMQTYWLLCRELF*IRIHI 498
LY + N Y+ SL +TYWL+ LF +H+
Sbjct: 514 LYLQNTNVTPYRFSLFRTYWLVWAVLFQAAVHV 546
>AY616144-1|AAT40457.1| 902|Drosophila melanogaster NMDA receptor
subunit 2-1c protein.
Length = 902
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 596 LYTDSYNNDFYKNSLMQTYWLLCRELF*IRIHI 498
LY + N Y+ SL +TYWL+ LF +H+
Sbjct: 514 LYLQNTNVTPYRFSLFRTYWLVWAVLFQAAVHV 546
>AY050491-1|AAL12479.1| 902|Drosophila melanogaster glutamate NMDA
receptor subunitvariant NR2-b protein.
Length = 902
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 596 LYTDSYNNDFYKNSLMQTYWLLCRELF*IRIHI 498
LY + N Y+ SL +TYWL+ LF +H+
Sbjct: 514 LYLQNTNVTPYRFSLFRTYWLVWAVLFQAAVHV 546
>AY050490-1|AAL12478.1| 902|Drosophila melanogaster glutamate NMDA
receptor subunitvariant NR2-a protein.
Length = 902
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 596 LYTDSYNNDFYKNSLMQTYWLLCRELF*IRIHI 498
LY + N Y+ SL +TYWL+ LF +H+
Sbjct: 514 LYLQNTNVTPYRFSLFRTYWLVWAVLFQAAVHV 546
>AL031027-9|CAA19838.1| 1012|Drosophila melanogaster EG:80H7.7
protein.
Length = 1012
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 596 LYTDSYNNDFYKNSLMQTYWLLCRELF*IRIHI 498
LY + N Y+ SL +TYWL+ LF +H+
Sbjct: 511 LYLQNTNVTPYRFSLFRTYWLVWAVLFQAAVHV 543
>AF381249-1|AAM46167.1| 841|Drosophila melanogaster NMDA receptor 2
protein.
Length = 841
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 596 LYTDSYNNDFYKNSLMQTYWLLCRELF*IRIHI 498
LY + N Y+ SL +TYWL+ LF +H+
Sbjct: 453 LYLQNTNVTPYRFSLFRTYWLVWAVLFQAAVHV 485
>AE014298-228|AAF45639.3| 902|Drosophila melanogaster CG33513-PB,
isoform B protein.
Length = 902
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 596 LYTDSYNNDFYKNSLMQTYWLLCRELF*IRIHI 498
LY + N Y+ SL +TYWL+ LF +H+
Sbjct: 514 LYLQNTNVTPYRFSLFRTYWLVWAVLFQAAVHV 546
>AE014298-227|AAN09051.2| 902|Drosophila melanogaster CG33513-PA,
isoform A protein.
Length = 902
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 596 LYTDSYNNDFYKNSLMQTYWLLCRELF*IRIHI 498
LY + N Y+ SL +TYWL+ LF +H+
Sbjct: 514 LYLQNTNVTPYRFSLFRTYWLVWAVLFQAAVHV 546
>AE014298-226|AAF45640.2| 1083|Drosophila melanogaster CG33513-PC,
isoform C protein.
Length = 1083
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 596 LYTDSYNNDFYKNSLMQTYWLLCRELF*IRIHI 498
LY + N Y+ SL +TYWL+ LF +H+
Sbjct: 695 LYLQNTNVTPYRFSLFRTYWLVWAVLFQAAVHV 727
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,423,366
Number of Sequences: 53049
Number of extensions: 406420
Number of successful extensions: 690
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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