Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_M16
(760 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0428 + 3055163-3055573 182 4e-46
06_01_0427 - 3054204-3054614 182 4e-46
06_01_0425 - 3045557-3046004,3046852-3046856 182 4e-46
06_01_0423 - 3039527-3039937 182 4e-46
05_04_0449 - 21355439-21355849 182 4e-46
04_03_0909 + 20748653-20749063 182 4e-46
01_06_1456 + 37507156-37507566 182 4e-46
06_01_0217 - 1644696-1645034,1645143-1645214 179 3e-45
03_03_0212 + 15479850-15479921,15479965-15480083,15480175-154802... 179 3e-45
11_01_0348 - 2607315-2607424,2608634-2609030 176 2e-44
02_03_0107 - 15303890-15304060,15304158-15304248,15304505-153046... 165 4e-41
02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596 163 1e-40
12_02_0048 - 12852335-12852745 161 5e-40
12_02_0047 - 12836779-12837189 149 3e-36
05_05_0297 - 23921648-23921758,23922011-23922089,23922774-239228... 116 2e-26
04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392 107 1e-23
09_04_0353 + 16915618-16916934 29 3.0
04_04_1347 + 32803664-32803796,32803891-32804093,32804202-328043... 29 4.0
03_01_0575 + 4247431-4247489,4248475-4248547,4248792-4249229,425... 29 5.3
03_06_0318 + 33103467-33104232,33104332-33105548 28 7.0
03_06_0244 + 32613914-32614666 28 9.3
>06_01_0428 + 3055163-3055573
Length = 136
Score = 182 bits (442), Expect = 4e-46
Identities = 88/93 (94%), Positives = 92/93 (98%)
Frame = -1
Query: 673 PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVG 494
PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVG
Sbjct: 44 PGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVG 103
Query: 493 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 395
LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 104 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -3
Query: 758 APRXQLATKAARKSAPSTGGVKKPHRYRP 672
APR QLATKAARKSAP+TGGVKKPHR+RP
Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRP 44
>06_01_0427 - 3054204-3054614
Length = 136
Score = 182 bits (442), Expect = 4e-46
Identities = 88/93 (94%), Positives = 92/93 (98%)
Frame = -1
Query: 673 PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVG 494
PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVG
Sbjct: 44 PGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVG 103
Query: 493 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 395
LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 104 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -3
Query: 758 APRXQLATKAARKSAPSTGGVKKPHRYRP 672
APR QLATKAARKSAP+TGGVKKPHR+RP
Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRP 44
>06_01_0425 - 3045557-3046004,3046852-3046856
Length = 150
Score = 182 bits (442), Expect = 4e-46
Identities = 88/93 (94%), Positives = 92/93 (98%)
Frame = -1
Query: 673 PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVG 494
PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVG
Sbjct: 58 PGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVG 117
Query: 493 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 395
LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 118 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 150
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = -3
Query: 752 RXQLATKAARKSAPSTGGVKKPHRYRP 672
R QLATKA KSAP+TGGVKKPHR+RP
Sbjct: 32 RKQLATKATCKSAPATGGVKKPHRFRP 58
>06_01_0423 - 3039527-3039937
Length = 136
Score = 182 bits (442), Expect = 4e-46
Identities = 88/93 (94%), Positives = 92/93 (98%)
Frame = -1
Query: 673 PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVG 494
PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVG
Sbjct: 44 PGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVG 103
Query: 493 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 395
LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 104 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -3
Query: 758 APRXQLATKAARKSAPSTGGVKKPHRYRP 672
APR QLATKAARKSAP+TGGVKKPHR+RP
Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRP 44
>05_04_0449 - 21355439-21355849
Length = 136
Score = 182 bits (442), Expect = 4e-46
Identities = 88/93 (94%), Positives = 92/93 (98%)
Frame = -1
Query: 673 PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVG 494
PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVG
Sbjct: 44 PGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVG 103
Query: 493 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 395
LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 104 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -3
Query: 758 APRXQLATKAARKSAPSTGGVKKPHRYRP 672
APR QLATKAARKSAP+TGGVKKPHR+RP
Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRP 44
>04_03_0909 + 20748653-20749063
Length = 136
Score = 182 bits (442), Expect = 4e-46
Identities = 88/93 (94%), Positives = 92/93 (98%)
Frame = -1
Query: 673 PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVG 494
PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVG
Sbjct: 44 PGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVG 103
Query: 493 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 395
LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 104 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -3
Query: 758 APRXQLATKAARKSAPSTGGVKKPHRYRP 672
APR QLATKAARKSAP+TGGVKKPHR+RP
Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRP 44
>01_06_1456 + 37507156-37507566
Length = 136
Score = 182 bits (442), Expect = 4e-46
Identities = 88/93 (94%), Positives = 92/93 (98%)
Frame = -1
Query: 673 PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVG 494
PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVG
Sbjct: 44 PGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVG 103
Query: 493 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 395
LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 104 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -3
Query: 758 APRXQLATKAARKSAPSTGGVKKPHRYRP 672
APR QLATKAARKSAP+TGGVKKPHR+RP
Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRP 44
>06_01_0217 - 1644696-1645034,1645143-1645214
Length = 136
Score = 179 bits (435), Expect = 3e-45
Identities = 88/93 (94%), Positives = 91/93 (97%)
Frame = -1
Query: 673 PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVG 494
PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVG
Sbjct: 44 PGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVG 103
Query: 493 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 395
LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 104 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
Score = 61.3 bits (142), Expect = 8e-10
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = -3
Query: 758 APRXQLATKAARKSAPSTGGVKKPHRYRP 672
APR QLATKAARKSAP+TGGVKKPHRYRP
Sbjct: 16 APRKQLATKAARKSAPTTGGVKKPHRYRP 44
>03_03_0212 +
15479850-15479921,15479965-15480083,15480175-15480265,
15480363-15480533
Length = 150
Score = 179 bits (435), Expect = 3e-45
Identities = 88/93 (94%), Positives = 91/93 (97%)
Frame = -1
Query: 673 PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVG 494
PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVG
Sbjct: 58 PGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVG 117
Query: 493 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 395
LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 118 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 150
Score = 47.6 bits (108), Expect = 1e-05
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = -3
Query: 743 LATKAARKSAPSTGGVKKPHRYRP 672
++ +AARKSAP+TGGVKKPHRYRP
Sbjct: 35 ISVQAARKSAPTTGGVKKPHRYRP 58
>11_01_0348 - 2607315-2607424,2608634-2609030
Length = 168
Score = 176 bits (428), Expect = 2e-44
Identities = 85/90 (94%), Positives = 89/90 (98%)
Frame = -1
Query: 673 PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVG 494
PGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVG
Sbjct: 44 PGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVG 103
Query: 493 LFEDTNLCAIHAKRVTIMPKDIQLARRIRG 404
LFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 104 LFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -3
Query: 758 APRXQLATKAARKSAPSTGGVKKPHRYRP 672
APR QLATKAARKSAP+TGGVKKPHR+RP
Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRP 44
>02_03_0107 -
15303890-15304060,15304158-15304248,15304505-15304614,
15304715-15304784,15306365-15306558
Length = 211
Score = 165 bits (400), Expect = 4e-41
Identities = 80/92 (86%), Positives = 87/92 (94%)
Frame = -1
Query: 673 PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVG 494
PGTVALREIR+YQK+TELLIRKLPFQRLVREIAQ FK D+RFQS A+ ALQEA+EAYLVG
Sbjct: 119 PGTVALREIRKYQKNTELLIRKLPFQRLVREIAQHFKHDMRFQSHAVLALQEAAEAYLVG 178
Query: 493 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 398
LFEDTNLCAIH+KRVTIM KD+QLARRIRGER
Sbjct: 179 LFEDTNLCAIHSKRVTIMSKDVQLARRIRGER 210
>02_03_0108 - 15324922-15325092,15325189-15325279,15325511-15325596
Length = 115
Score = 163 bits (397), Expect = 1e-40
Identities = 80/92 (86%), Positives = 87/92 (94%)
Frame = -1
Query: 673 PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVG 494
PGTVALREIR+YQK+TELLIRKLPFQRLVREIAQ FK D+RFQS A+ ALQEA+EAYLVG
Sbjct: 23 PGTVALREIRKYQKNTELLIRKLPFQRLVREIAQLFKHDMRFQSHAVLALQEAAEAYLVG 82
Query: 493 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 398
LFEDTNLCAIH+KRVTIM KD+QLARRIRGER
Sbjct: 83 LFEDTNLCAIHSKRVTIMSKDVQLARRIRGER 114
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -3
Query: 731 AARKSAPSTGGVKKPHRYRP 672
AARKSAP GGVKKPHRYRP
Sbjct: 4 AARKSAPCIGGVKKPHRYRP 23
>12_02_0048 - 12852335-12852745
Length = 136
Score = 161 bits (391), Expect = 5e-40
Identities = 78/93 (83%), Positives = 87/93 (93%)
Frame = -1
Query: 673 PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVG 494
PGTVALREIR YQKSTELLIRKLPFQRLV+EIAQD ++ +RFQS+A+ ALQEA+E YLVG
Sbjct: 44 PGTVALREIRTYQKSTELLIRKLPFQRLVQEIAQDVRSYVRFQSSAVVALQEAAETYLVG 103
Query: 493 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 395
LF+DTNLC IHAKRVTIMPKDIQLARRIRGE+A
Sbjct: 104 LFKDTNLCVIHAKRVTIMPKDIQLARRIRGEKA 136
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -3
Query: 755 PRXQLATKAARKSAPSTGGVKKPHRYRP 672
PR L K ARKSAP+ G+KKPHR++P
Sbjct: 17 PRKLLVMKVARKSAPTMAGLKKPHRFKP 44
>12_02_0047 - 12836779-12837189
Length = 136
Score = 149 bits (360), Expect = 3e-36
Identities = 73/93 (78%), Positives = 81/93 (87%)
Frame = -1
Query: 673 PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVG 494
P VALREIR YQKSTELLIRKLPFQRLV+EI QD ++ +RFQS+A+ LQEA+E YLVG
Sbjct: 44 PWIVALREIRTYQKSTELLIRKLPFQRLVQEITQDIRSYVRFQSSAMAVLQEAAETYLVG 103
Query: 493 LFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 395
LFEDTNLC IHAKRVTIMPKDIQLAR I GE+A
Sbjct: 104 LFEDTNLCVIHAKRVTIMPKDIQLARCIGGEKA 136
Score = 45.2 bits (102), Expect = 6e-05
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = -3
Query: 755 PRXQLATKAARKSAPSTGGVKKPHRYRPW 669
PR L K ARKSAP G+KKPHR+ PW
Sbjct: 17 PRKLLVMKVARKSAPMMAGLKKPHRFNPW 45
>05_05_0297 -
23921648-23921758,23922011-23922089,23922774-23922822,
23923180-23923255,23923693-23923767,23923862-23923992,
23924830-23924935
Length = 208
Score = 116 bits (280), Expect = 2e-26
Identities = 61/93 (65%), Positives = 73/93 (78%), Gaps = 1/93 (1%)
Frame = -1
Query: 673 PGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDL-RFQSAAIGALQEASEAYLV 497
PGTVALREIR++QK+TELLI PF RLVREI + D+ R+ A+ ALQEA+E +LV
Sbjct: 52 PGTVALREIRKFQKTTELLIPFAPFSRLVREITDFYSKDVSRWTLEALLALQEAAEYHLV 111
Query: 496 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 398
+FE +NLCAIHAKRVTIM KD+QLARRI G R
Sbjct: 112 DIFEVSNLCAIHAKRVTIMQKDMQLARRIGGRR 144
>04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392
Length = 106
Score = 107 bits (256), Expect = 1e-23
Identities = 52/56 (92%), Positives = 54/56 (96%)
Frame = -1
Query: 562 TDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 395
TDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 51 TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 106
Score = 62.9 bits (146), Expect = 3e-10
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = -3
Query: 758 APRXQLATKAARKSAPSTGGVKKPHRYRPW 669
APR QLATKAARKSAP+TGGVKKPHRY PW
Sbjct: 16 APRKQLATKAARKSAPTTGGVKKPHRYPPW 45
>09_04_0353 + 16915618-16916934
Length = 438
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 401 FTTDSSSKLNILRHDGHTFGVNSTQVGV 484
F DS+S +L ++ TFG NST+V V
Sbjct: 163 FYGDSASSAGVLANETFTFGTNSTRVAV 190
>04_04_1347 +
32803664-32803796,32803891-32804093,32804202-32804383,
32804514-32804798,32804901-32804959,32805052-32805088,
32805186-32805257,32805336-32806005
Length = 546
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 753 AXTTCYKSGAKISAEHWWSQEATSLSPLVQWPFVKFVV 640
A T Y G IS +H+W+ A + PL+ + F+V
Sbjct: 94 ANLTMYSGGWNISDQHYWASVAYTAVPLILVGMLWFIV 131
>03_01_0575 +
4247431-4247489,4248475-4248547,4248792-4249229,
4252122-4253339
Length = 595
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = -1
Query: 688 HIVIAPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASE 509
+I+ P V L + Y+ + EL + K F L R+ + + L FQS + E
Sbjct: 167 YIMSRPRPVYLIDFACYKPADELKVSKAEFIDLARKSGKFDEDSLAFQSRLLAKSGIGDE 226
Query: 508 AYLVG-LFEDTNLCA 467
+Y+ +FE CA
Sbjct: 227 SYMPRCVFEPGTNCA 241
>03_06_0318 + 33103467-33104232,33104332-33105548
Length = 660
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = -1
Query: 712 RALVESRSHIVIAPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAI 533
+ L E R+ IA R ++ + + L +QR++ E +Q + DL+ +A +
Sbjct: 384 KELEEERNASAIATNQTMSMITRLQEEKAAMQMETLQYQRMMEEQSQYDREDLQKMAAMV 443
Query: 532 GALQEASEAY 503
L+ E Y
Sbjct: 444 QELEAEIEGY 453
>03_06_0244 + 32613914-32614666
Length = 250
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 519 SWRAPMAADWKRKSVLKS*AISLTRRWKGSLRISNSVD 632
SW A WK +V + + RRWK S+ S+D
Sbjct: 207 SWARHQAMQWKASAVSRLVPAAHRRRWKASVVSRRSLD 244
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,037,526
Number of Sequences: 37544
Number of extensions: 322485
Number of successful extensions: 791
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -