Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_M14
         (670 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    25   0.86 
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    25   0.86 
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    24   1.1  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    23   3.5  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    23   3.5  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    23   3.5  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    23   3.5  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    23   3.5  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    23   3.5  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    23   3.5  

>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 173 YSRYFNYHSSYLHNYTYHF 117
           YS Y NY+++Y +NY  ++
Sbjct: 91  YSNYNNYNNNYNNNYNNNY 109


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 173 YSRYFNYHSSYLHNYTYHF 117
           YS Y NY+++Y +NY  ++
Sbjct: 91  YSNYNNYNNNYNNNYNNNY 109


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 197 NTNIMRLDYSRYFNYHSSYLHNY 129
           N N    +Y+ Y NY+++Y +NY
Sbjct: 326 NYNNYNNNYNNYNNYNNNYNNNY 348


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 173 YSRYFNYHSSYLHNY 129
           YS Y NY+++Y  NY
Sbjct: 91  YSNYNNYNNNYNTNY 105


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 173 YSRYFNYHSSYLHNY 129
           YS Y NY+++Y  NY
Sbjct: 91  YSNYNNYNNNYNTNY 105


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 173 YSRYFNYHSSYLHNY 129
           YS Y NY+++Y  NY
Sbjct: 91  YSNYNNYNNNYNTNY 105


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 173 YSRYFNYHSSYLHNY 129
           YS Y NY+++Y  NY
Sbjct: 91  YSNYNNYNNNYNTNY 105


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 173 YSRYFNYHSSYLHNY 129
           YS Y NY+++Y  NY
Sbjct: 91  YSNYNNYNNNYNTNY 105


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 173 YSRYFNYHSSYLHNY 129
           YS Y NY+++Y  NY
Sbjct: 91  YSNYNNYNNNYNTNY 105


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 173 YSRYFNYHSSYLHNY 129
           YS Y NY+++Y  NY
Sbjct: 91  YSNYNNYNNNYNTNY 105


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,887
Number of Sequences: 438
Number of extensions: 3231
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)