Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_M13
(737 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC121023-1|AAI21024.1| 612|Homo sapiens component of oligomeric... 149 8e-36
BC121022-1|AAI21023.1| 612|Homo sapiens component of oligomeric... 149 8e-36
AK056344-1|BAB71157.1| 612|Homo sapiens protein ( Homo sapiens ... 148 2e-35
BC017492-1|AAH17492.1| 219|Homo sapiens COG8 protein protein. 97 8e-20
AK025968-1|BAB15301.1| 219|Homo sapiens protein ( Homo sapiens ... 97 8e-20
EF068222-1|ABK64187.1| 2358|Homo sapiens jumonji domain-containi... 31 4.3
BX537954-1|CAD97921.1| 2210|Homo sapiens hypothetical protein pr... 31 4.3
AL831917-1|CAD38578.1| 2162|Homo sapiens hypothetical protein pr... 31 4.3
AL713895-2|CAI10948.1| 2081|Homo sapiens jumonji domain containi... 31 4.3
AL713895-1|CAI10947.1| 955|Homo sapiens jumonji domain containi... 31 4.3
AL590502-1|CAO03490.1| 2081|Homo sapiens jumonji domain containi... 31 4.3
AB037801-1|BAA92618.1| 1265|Homo sapiens KIAA1380 protein protein. 31 4.3
>BC121023-1|AAI21024.1| 612|Homo sapiens component of oligomeric
golgi complex 8 protein.
Length = 612
Score = 149 bits (362), Expect = 8e-36
Identities = 80/238 (33%), Positives = 133/238 (55%), Gaps = 10/238 (4%)
Frame = -1
Query: 719 WLKLKVEIFAHILNXNLGKEDEANFESLLNQCMYLCLSFGRVGADMRCVLTPLFRDCILK 540
W+ KV F +L +L + + +SLL QCMY LSF RVGAD R L P+F+ +
Sbjct: 318 WVLQKVSQFLQVLETDLYRGIGGHLDSLLGQCMYFGLSFSRVGADFRGQLAPVFQRVAIS 377
Query: 539 QFHSSLDKVSDHFEQQMRAYKV---PSI---KNYPRPITETAKG---PPENLLDYYPLAE 387
F ++ + + F+++M +Y + P+I N P + T G PP LLD+ PLA
Sbjct: 378 TFQKAIQETVEKFQEEMNSYMLISAPAILGTSNMPAAVPATQPGTLQPPMVLLDFPPLAC 437
Query: 386 YCNGMLTVLNSLRVTAPLNIAKEVYNSYKESLNSTVQVLLNFYYREQQGFTDVERQNYVS 207
+ N +L N LR+ P+ +A++V + +++L +++L F+ E+ F+ E++ +V
Sbjct: 438 FLNNILVAFNDLRLCCPVALAQDVTGALEDALAKVTKIILAFHRAEEAAFSSGEQELFVQ 497
Query: 206 LCLSFRDDLIPYITKCLSQSFPSTQIAELLGVTLTVLQD-SKILYIDLHAMCEPLNVI 36
C F +DL+PY+ +CL FP QIA+ LG+ T L + ++++ A+ EPL I
Sbjct: 498 FCTVFLEDLVPYLNRCLQVLFPPAQIAQTLGIPPTQLSKYGNLGHVNIGAIQEPLAFI 555
>BC121022-1|AAI21023.1| 612|Homo sapiens component of oligomeric
golgi complex 8 protein.
Length = 612
Score = 149 bits (362), Expect = 8e-36
Identities = 80/238 (33%), Positives = 133/238 (55%), Gaps = 10/238 (4%)
Frame = -1
Query: 719 WLKLKVEIFAHILNXNLGKEDEANFESLLNQCMYLCLSFGRVGADMRCVLTPLFRDCILK 540
W+ KV F +L +L + + +SLL QCMY LSF RVGAD R L P+F+ +
Sbjct: 318 WVLQKVSQFLQVLETDLYRGIGGHLDSLLGQCMYFGLSFSRVGADFRGQLAPVFQRVAIS 377
Query: 539 QFHSSLDKVSDHFEQQMRAYKV---PSI---KNYPRPITETAKG---PPENLLDYYPLAE 387
F ++ + + F+++M +Y + P+I N P + T G PP LLD+ PLA
Sbjct: 378 TFQKAIQETVEKFQEEMNSYMLISAPAILGTSNMPAAVPATQPGTLQPPMVLLDFPPLAC 437
Query: 386 YCNGMLTVLNSLRVTAPLNIAKEVYNSYKESLNSTVQVLLNFYYREQQGFTDVERQNYVS 207
+ N +L N LR+ P+ +A++V + +++L +++L F+ E+ F+ E++ +V
Sbjct: 438 FLNNILVAFNDLRLCCPVALAQDVTGALEDALAKVTKIILAFHRAEEAAFSSGEQELFVQ 497
Query: 206 LCLSFRDDLIPYITKCLSQSFPSTQIAELLGVTLTVLQD-SKILYIDLHAMCEPLNVI 36
C F +DL+PY+ +CL FP QIA+ LG+ T L + ++++ A+ EPL I
Sbjct: 498 FCTVFLEDLVPYLNRCLQVLFPPAQIAQTLGIPPTQLSKYGNLGHVNIGAIQEPLAFI 555
>AK056344-1|BAB71157.1| 612|Homo sapiens protein ( Homo sapiens cDNA
FLJ31782 fis, clone NT2RI2008336, highly similar to Homo
sapiens component of oligomeric golgi complex 8 (COG8),
).
Length = 612
Score = 148 bits (358), Expect = 2e-35
Identities = 79/238 (33%), Positives = 133/238 (55%), Gaps = 10/238 (4%)
Frame = -1
Query: 719 WLKLKVEIFAHILNXNLGKEDEANFESLLNQCMYLCLSFGRVGADMRCVLTPLFRDCILK 540
W+ KV F +L +L + + +SLL +CMY LSF RVGAD R L P+F+ +
Sbjct: 318 WVLQKVSQFLQVLETDLYRGIGGHLDSLLGRCMYFGLSFSRVGADFRGQLAPVFQRVAIS 377
Query: 539 QFHSSLDKVSDHFEQQMRAYKV---PSI---KNYPRPITETAKG---PPENLLDYYPLAE 387
F ++ + + F+++M +Y + P+I N P + T G PP LLD+ PLA
Sbjct: 378 TFQKAIQETVEKFQEEMNSYMLISAPAILGTSNMPAAVPATQPGTLQPPMVLLDFPPLAC 437
Query: 386 YCNGMLTVLNSLRVTAPLNIAKEVYNSYKESLNSTVQVLLNFYYREQQGFTDVERQNYVS 207
+ N +L N LR+ P+ +A++V + +++L +++L F+ E+ F+ E++ +V
Sbjct: 438 FLNNILVAFNDLRLCCPVALAQDVTGALEDALAKVTKIILAFHRAEEAAFSSGEQELFVQ 497
Query: 206 LCLSFRDDLIPYITKCLSQSFPSTQIAELLGVTLTVLQD-SKILYIDLHAMCEPLNVI 36
C F +DL+PY+ +CL FP QIA+ LG+ T L + ++++ A+ EPL I
Sbjct: 498 FCTVFLEDLVPYLNRCLQVLFPPAQIAQTLGIPPTQLSKYGNLGHVNIGAIQEPLAFI 555
>BC017492-1|AAH17492.1| 219|Homo sapiens COG8 protein protein.
Length = 219
Score = 96.7 bits (230), Expect = 8e-20
Identities = 49/146 (33%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Frame = -1
Query: 461 NYPRPITETAKG---PPENLLDYYPLAEYCNGMLTVLNSLRVTAPLNIAKEVYNSYKESL 291
N P + T G PP LLD+ PLA + N +L N LR+ P+ +A++V + +++L
Sbjct: 17 NMPAAVPATQPGTLQPPMVLLDFPPLACFLNNILVAFNDLRLCCPVALAQDVTGALEDAL 76
Query: 290 NSTVQVLLNFYYREQQGFTDVERQNYVSLCLSFRDDLIPYITKCLSQSFPSTQIAELLGV 111
+++L F+ E+ F+ E++ +V C F +DL+PY+ +CL FP QIA+ LG+
Sbjct: 77 AKVTKIILAFHRAEEAAFSSGEQELFVQFCTVFLEDLVPYLNRCLQVLFPPAQIAQTLGI 136
Query: 110 TLTVLQD-SKILYIDLHAMCEPLNVI 36
T L + ++++ A+ EPL I
Sbjct: 137 PPTQLSKYGNLGHVNIGAIQEPLAFI 162
>AK025968-1|BAB15301.1| 219|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22315 fis, clone HRC05256. ).
Length = 219
Score = 96.7 bits (230), Expect = 8e-20
Identities = 49/146 (33%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Frame = -1
Query: 461 NYPRPITETAKG---PPENLLDYYPLAEYCNGMLTVLNSLRVTAPLNIAKEVYNSYKESL 291
N P + T G PP LLD+ PLA + N +L N LR+ P+ +A++V + +++L
Sbjct: 17 NMPAAVPATQPGTLQPPMVLLDFPPLACFLNNILVAFNDLRLCCPVALAQDVTGALEDAL 76
Query: 290 NSTVQVLLNFYYREQQGFTDVERQNYVSLCLSFRDDLIPYITKCLSQSFPSTQIAELLGV 111
+++L F+ E+ F+ E++ +V C F +DL+PY+ +CL FP QIA+ LG+
Sbjct: 77 AKVTKIILAFHRAEEAAFSSGEQELFVQFCTVFLEDLVPYLNRCLQVLFPPAQIAQTLGI 136
Query: 110 TLTVLQD-SKILYIDLHAMCEPLNVI 36
T L + ++++ A+ EPL I
Sbjct: 137 PPTQLSKYGNLGHVNIGAIQEPLAFI 162
>EF068222-1|ABK64187.1| 2358|Homo sapiens jumonji domain-containing 1
C splice variant protein.
Length = 2358
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -1
Query: 617 LCLSFGRVGADMRCVLTPLFRDCILKQFHSSLDKVSDHFEQQMRAYKVPSIKNYPRPITE 438
+ L FG AD+ + + +K+F ++VS + + V +K++P
Sbjct: 2029 ISLDFGDHQADLLNCKDSIISNANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDF 2088
Query: 437 TAKGPP--ENLLDYYPLAEYCN 378
P E+LL PL EYCN
Sbjct: 2089 KTMMPARYEDLLKSLPLPEYCN 2110
>BX537954-1|CAD97921.1| 2210|Homo sapiens hypothetical protein
protein.
Length = 2210
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -1
Query: 617 LCLSFGRVGADMRCVLTPLFRDCILKQFHSSLDKVSDHFEQQMRAYKVPSIKNYPRPITE 438
+ L FG AD+ + + +K+F ++VS + + V +K++P
Sbjct: 1906 ISLDFGDHQADLLNCKDSIISNANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDF 1965
Query: 437 TAKGPP--ENLLDYYPLAEYCN 378
P E+LL PL EYCN
Sbjct: 1966 KTMMPARYEDLLKSLPLPEYCN 1987
>AL831917-1|CAD38578.1| 2162|Homo sapiens hypothetical protein
protein.
Length = 2162
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -1
Query: 617 LCLSFGRVGADMRCVLTPLFRDCILKQFHSSLDKVSDHFEQQMRAYKVPSIKNYPRPITE 438
+ L FG AD+ + + +K+F ++VS + + V +K++P
Sbjct: 1833 ISLDFGDHQADLLNCKDSIISNANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDF 1892
Query: 437 TAKGPP--ENLLDYYPLAEYCN 378
P E+LL PL EYCN
Sbjct: 1893 KTMMPARYEDLLKSLPLPEYCN 1914
>AL713895-2|CAI10948.1| 2081|Homo sapiens jumonji domain containing 1C
protein.
Length = 2081
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -1
Query: 617 LCLSFGRVGADMRCVLTPLFRDCILKQFHSSLDKVSDHFEQQMRAYKVPSIKNYPRPITE 438
+ L FG AD+ + + +K+F ++VS + + V +K++P
Sbjct: 1752 ISLDFGDHQADLLNCKDSIISNANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDF 1811
Query: 437 TAKGPP--ENLLDYYPLAEYCN 378
P E+LL PL EYCN
Sbjct: 1812 KTMMPARYEDLLKSLPLPEYCN 1833
>AL713895-1|CAI10947.1| 955|Homo sapiens jumonji domain containing 1C
protein.
Length = 955
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -1
Query: 617 LCLSFGRVGADMRCVLTPLFRDCILKQFHSSLDKVSDHFEQQMRAYKVPSIKNYPRPITE 438
+ L FG AD+ + + +K+F ++VS + + V +K++P
Sbjct: 757 ISLDFGDHQADLLNCKDSIISNANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDF 816
Query: 437 TAKGPP--ENLLDYYPLAEYCN 378
P E+LL PL EYCN
Sbjct: 817 KTMMPARYEDLLKSLPLPEYCN 838
>AL590502-1|CAO03490.1| 2081|Homo sapiens jumonji domain containing 1C
protein.
Length = 2081
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -1
Query: 617 LCLSFGRVGADMRCVLTPLFRDCILKQFHSSLDKVSDHFEQQMRAYKVPSIKNYPRPITE 438
+ L FG AD+ + + +K+F ++VS + + V +K++P
Sbjct: 1752 ISLDFGDHQADLLNCKDSIISNANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDF 1811
Query: 437 TAKGPP--ENLLDYYPLAEYCN 378
P E+LL PL EYCN
Sbjct: 1812 KTMMPARYEDLLKSLPLPEYCN 1833
>AB037801-1|BAA92618.1| 1265|Homo sapiens KIAA1380 protein protein.
Length = 1265
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -1
Query: 617 LCLSFGRVGADMRCVLTPLFRDCILKQFHSSLDKVSDHFEQQMRAYKVPSIKNYPRPITE 438
+ L FG AD+ + + +K+F ++VS + + V +K++P
Sbjct: 936 ISLDFGDHQADLLNCKDSIISNANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDF 995
Query: 437 TAKGPP--ENLLDYYPLAEYCN 378
P E+LL PL EYCN
Sbjct: 996 KTMMPARYEDLLKSLPLPEYCN 1017
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,569,417
Number of Sequences: 237096
Number of extensions: 1979010
Number of successful extensions: 7228
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7225
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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