Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_M13
         (737 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   3.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   3.0  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    22   5.2  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              22   5.2  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.1  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -1

Query: 404 YYPLAEYCNGMLTVLNSLRVTAPLNIAKEV 315
           YYP   + NG+         T PL++ K V
Sbjct: 294 YYPTMRFRNGLAFPQRETGATVPLHMQKYV 323


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -1

Query: 404 YYPLAEYCNGMLTVLNSLRVTAPLNIAKEV 315
           YYP   + NG+         T PL++ K V
Sbjct: 294 YYPTMRFRNGLAFPQRETGATVPLHMQKYV 323


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 574 THRMSAPTLPNERQRYIHW 630
           +H  +AP +P E QR + W
Sbjct: 101 SHIPTAPPIPPEIQRALEW 119


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 141 FNTNSRVARCYFDCSSRQ*NFVH 73
           F+ N     CY DC  ++  FV+
Sbjct: 52  FDKNDEKLACYVDCMLKKVGFVN 74


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -2

Query: 511 VITLSNKCVHTKFLVSKT 458
           ++   N+C H +FL++ T
Sbjct: 166 ILKTKNECDHVQFLITNT 183


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -2

Query: 511 VITLSNKCVHTKFLVSKT 458
           ++   N+C H +FL++ T
Sbjct: 166 ILKTKNECDHVQFLITNT 183


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -2

Query: 520  IKSVITLSNKCVHTKFLVSKTIQDQLRKRQRVLPKTSLIT 401
            + S   +SN+C      V+K++QD    RQ    + ++I+
Sbjct: 1624 VASYALISNQCEGDSLNVAKSLQDHDCIRQERTQQRNVIS 1663


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = -1

Query: 299 ESLNSTVQVLLNFYYREQQGFTDVERQNYVS 207
           E +++   ++ N Y  E Q   ++ +  YVS
Sbjct: 638 EPIDAQFDIIQNIYIPEPQDIENIFKYGYVS 668


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,023
Number of Sequences: 438
Number of extensions: 4333
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)