Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_M10
         (618 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IIJ7 Cluster: Putative uncharacterized protein; n=3; ...    34   3.1  
UniRef50_Q49460 Cluster: Uncharacterized ABC transporter permeas...    33   5.5  

>UniRef50_Q8IIJ7 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 1283

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -1

Query: 612 NSAGRYTVYNVLLNSRNRNRHNYFRT*GTGDLHGCQKVKYQDHTIFYSNK 463
           N+    T  N+  +S N   HNY++          +K KY D+ IFY NK
Sbjct: 155 NNMYNNTYNNIYTDSYNNTCHNYYKNRNNNIRDHTRKGKYIDNNIFYYNK 204


>UniRef50_Q49460 Cluster: Uncharacterized ABC transporter permease
            MG468; n=9; Mycoplasma genitalium|Rep: Uncharacterized
            ABC transporter permease MG468 - Mycoplasma genitalium
          Length = 1783

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +2

Query: 59   RNLISTDQETSVFSVSFLTYSNLYGIGTFVYV 154
            RNLIS+DQE +V   +   Y+N   IG +VY+
Sbjct: 1395 RNLISSDQEMNVIVNAGFQYANNINIGDYVYI 1426


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,294,014
Number of Sequences: 1657284
Number of extensions: 9501220
Number of successful extensions: 19235
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19233
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)