Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_M10
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    25   0.51 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    25   0.67 
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   1.6  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    23   2.7  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   4.7  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   6.3  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   8.3  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.3  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 135 IPYKFEYVKKLTLNTLVSWSVEIKFLHNLNIMSYE 31
           I  K +Y K L L  ++ WS+E    + L+   Y+
Sbjct: 343 IAIKVQYAKSLNLAGVMIWSIETDDFNGLSGTKYQ 377


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 24.6 bits (51), Expect = 0.67
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 135 IPYKFEYVKKLTLNTLVSWSVE 70
           I  K EY K L L  ++ WS+E
Sbjct: 339 ISNKVEYAKSLNLGGVMIWSIE 360


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 484 YHILFK*KMSSIVNYIITHITL 419
           Y +LF     S +NY ITH+ L
Sbjct: 47  YTLLFGRSRKSRMNYFITHLAL 68


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 135 IPYKFEYVKKLTLNTLVSWSVEIKFLH 55
           +  K EY K+  L  +  WS+E   +H
Sbjct: 332 VTIKTEYAKEKNLAGVFIWSIETDDMH 358


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 135 IPYKFEYVKKLTLNTLVSWSVEIKFLH 55
           +  K +Y K   L  ++ WS+E   LH
Sbjct: 331 VALKAQYAKDNNLAGVMIWSIETDDLH 357


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 179 RWNSASSAKRRQTFQFHTNLSTLKNS 102
           R N  SSAKR+Q    H +    K S
Sbjct: 201 RENGKSSAKRKQLVSEHPDSPNSKKS 226


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = -2

Query: 185 VCRWNSASSAKRRQTFQFHTNLSTLKNSH*THWFLGQLRL 66
           VC  N     + RQT+     L   K  H  H+   + R+
Sbjct: 149 VCGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRI 188


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = -2

Query: 185 VCRWNSASSAKRRQTFQFHTNLSTLKNSH*THWFLGQLRL 66
           VC  N     + RQT+     L   K  H  H+   + R+
Sbjct: 208 VCGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRI 247


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,314
Number of Sequences: 336
Number of extensions: 2869
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)