Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_L23
         (307 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5BK15 Cluster: Putative uncharacterized protein; n=1; ...    33   0.94 
UniRef50_Q4VR27 Cluster: PTet01; n=9; Campylobacter|Rep: PTet01 ...    31   5.0  
UniRef50_Q5AEZ6 Cluster: Putative uncharacterized protein; n=2; ...    31   5.0  
UniRef50_A2R5K5 Cluster: Function: contains domain typical for s...    30   8.8  

>UniRef50_A5BK15 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 672

 Score = 33.5 bits (73), Expect = 0.94
 Identities = 19/68 (27%), Positives = 35/68 (51%)
 Frame = +2

Query: 80  ILWQIFILSLTLHRXYLTKGKKNKNYLLQ*KISLH*IVLILNLHYRFYLQNTVAFRSVFQ 259
           ++  +F   L +HR Y  KG     Y  + KI  +  +  L+L Y F++  ++  +S+FQ
Sbjct: 412 VMGNMFCTELRIHRRYDLKGSSQGRYTDKDKIDSNTTLKDLDLSYEFHMDKSLR-KSLFQ 470

Query: 260 WIVIENTF 283
            I ++  F
Sbjct: 471 QISLDCMF 478


>UniRef50_Q4VR27 Cluster: PTet01; n=9; Campylobacter|Rep: PTet01 -
            Campylobacter jejuni
          Length = 1932

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +1

Query: 34   LLTNYIXRQWSAAXYYIMANIHIIFNTSSNXSYKRKEK*KLSFTIKNF 177
            ++ N++ RQW+   Y+   N +I+  T+ +     +EK     T  NF
Sbjct: 1052 VVPNHLARQWNDEFYHAYTNANILVATNDDLKKDNREKFFSKITTNNF 1099


>UniRef50_Q5AEZ6 Cluster: Putative uncharacterized protein; n=2;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 108

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = +1

Query: 151 KLSFTIKNFIT-LNCIN--IKLTL*ILSTKYCSISVSFSMDCHRKYI 282
           K  FT+  FI  + CI+  IK  +   STKY  +S+S  + C +KY+
Sbjct: 18  KKEFTLMLFIVEIYCISRPIKTQIYPKSTKYLGLSISGELCCQKKYV 64


>UniRef50_A2R5K5 Cluster: Function: contains domain typical for
           sugar transporter; n=1; Aspergillus niger|Rep: Function:
           contains domain typical for sugar transporter -
           Aspergillus niger
          Length = 532

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +2

Query: 62  GVPLXTILWQIFILSLTLHRXYLTK 136
           G+P+  +LW +  L+ TLH+ Y++K
Sbjct: 341 GLPVLCLLWAVAGLTFTLHKTYISK 365


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,293,545
Number of Sequences: 1657284
Number of extensions: 2829606
Number of successful extensions: 6610
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6610
length of database: 575,637,011
effective HSP length: 78
effective length of database: 446,368,859
effective search space used: 10266483757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)