Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_L23
         (307 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    25   0.64 
AF071161-1|AAC79997.1|  218|Anopheles gambiae glutathione S-tran...    25   0.85 
CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein ...    24   1.5  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    21   7.9  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 260 IEKLTEMLQYFVDKIYNVSLILI 192
           +EK  EML+   D++Y+V+ I+I
Sbjct: 95  LEKFEEMLKRISDEVYDVNPIII 117


>AF071161-1|AAC79997.1|  218|Anopheles gambiae glutathione
           S-transferase D7 protein.
          Length = 218

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +1

Query: 25  FEKLLTNYIXRQWSAAXYYIMANIHIIFNTSSNXSYK 135
           FE +L  Y   QWSAA ++ +A+I +    S   +++
Sbjct: 139 FEAMLKQY---QWSAANHFTIADIALCVTVSQIEAFQ 172


>CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein
           protein.
          Length = 207

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -3

Query: 263 SIEKLTEMLQYFVDKIYNVSLILIQF 186
           S+E+L + L+YFV+  + V  +  +F
Sbjct: 82  SVERLAKALEYFVENGHEVYAVFPRF 107


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +1

Query: 151 KLSFTIKNFITLNCINIKLTL*ILSTKYCSISVSFSMDCHRKYISCN 291
           KL   +K F+    +N   T  I S     + +SF    H+K  +C+
Sbjct: 410 KLVLVLKQFLLQRDLNEVFTGGISSYSLILMCISFLQQHHQKPNACS 456


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,574
Number of Sequences: 2352
Number of extensions: 2718
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19992474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)