Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_L23
         (307 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    22   2.0  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    22   2.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   4.5  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              20   6.0  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    20   7.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   7.9  
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...    20   7.9  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    20   7.9  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    20   7.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   7.9  

>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 301 LLLNYMKCIFYDNPLKN 251
           +L NY+KC+  + P  N
Sbjct: 39  ILTNYIKCMLDEGPCTN 55


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 301 LLLNYMKCIFYDNPLKN 251
           +L NY+KC+  + P  N
Sbjct: 39  ILTNYIKCMLDEGPCTN 55


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 194 LILNLHYRFYLQNTVAFRSVFQW 262
           L+LN +Y   L N + +   F W
Sbjct: 265 LLLNRYYLERLSNDLPYLEEFDW 287



 Score = 19.8 bits (39), Expect = 7.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 225 R*NL*CKFNINTI*CNEIFYCK 160
           R +L C F +N +  +EIFY K
Sbjct: 559 RNSLDCFFTMNDLEPSEIFYEK 580


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 220 LSTKYCSISVSFSMDCHRKYISCN 291
           L T +  I+++   D HRK++  N
Sbjct: 106 LKTFFHKIALTCEDDVHRKFLHVN 129


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +1

Query: 259 MDCHRKYISC 288
           +DCH  +I+C
Sbjct: 361 LDCHTAHIAC 370


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 225 R*NL*CKFNINTI*CNEIFYCK 160
           R +L C F +N +  +EIFY K
Sbjct: 559 RNSLDCFFTMNDLEPSEIFYEK 580


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +1

Query: 259 MDCHRKYISC 288
           +DCH  +I+C
Sbjct: 72  LDCHTAHIAC 81


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +2

Query: 191 VLILNLHYR 217
           ++ILN+HYR
Sbjct: 317 IVILNVHYR 325


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +1

Query: 259 MDCHRKYISC 288
           +DCH  +I+C
Sbjct: 361 LDCHTAHIAC 370


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 215 YNVSLILIQFSVMKFFIV 162
           YN   I +QFSV+  F++
Sbjct: 694 YNCVPINVQFSVLYGFVI 711


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,961
Number of Sequences: 438
Number of extensions: 1121
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6493812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)