Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_L22
(838 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY027862-1|AAK15788.2| 344|Homo sapiens mammalian ependymin rel... 36 0.14
BC042111-1|AAH42111.1| 522|Homo sapiens RASIP1 protein protein. 34 0.56
BC028614-1|AAH28614.1| 963|Homo sapiens Ras interacting protein... 34 0.56
AY378097-1|AAR24580.1| 962|Homo sapiens Ras-interacting protein... 34 0.56
BC056886-1|AAH56886.1| 392|Homo sapiens LUC7-like 2 (S. cerevis... 31 6.8
BC050708-1|AAH50708.1| 392|Homo sapiens LUC7-like 2 (S. cerevis... 31 6.8
BC042625-1|AAH42625.1| 391|Homo sapiens LUC7L2 protein protein. 31 6.8
BC017163-1|AAH17163.1| 392|Homo sapiens LUC7-like 2 (S. cerevis... 31 6.8
AK022895-1|BAB14297.1| 392|Homo sapiens protein ( Homo sapiens ... 31 6.8
AK001519-1|BAA91737.1| 392|Homo sapiens protein ( Homo sapiens ... 31 6.8
AK001476-1|BAA91713.1| 392|Homo sapiens protein ( Homo sapiens ... 31 6.8
AF151832-1|AAD34069.1| 402|Homo sapiens CGI-74 protein protein. 31 6.8
AF151817-1|AAD34054.1| 383|Homo sapiens CGI-59 protein protein. 31 6.8
AK098244-1|BAC05269.1| 584|Homo sapiens protein ( Homo sapiens ... 30 9.0
>AY027862-1|AAK15788.2| 344|Homo sapiens mammalian ependymin
related protein 1 protein.
Length = 344
Score = 36.3 bits (80), Expect = 0.14
Identities = 22/57 (38%), Positives = 26/57 (45%)
Frame = +1
Query: 361 SERHSPRRAVSSCSNRRSHPGRHSRRTIHYSLRGGSVSRSGTADHGSPTLYTPCRSQ 531
SE S RR S PGR+S R IH+SL V +GT GS P + Q
Sbjct: 21 SENRSGRRQWQQAVAAGSGPGRNSSRAIHWSLPRALVPATGTRASGSQKRQRPPKGQ 77
>BC042111-1|AAH42111.1| 522|Homo sapiens RASIP1 protein protein.
Length = 522
Score = 34.3 bits (75), Expect = 0.56
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 337 AASLDPERSERHSPRRAVSSCSNRRSHPGRHSRRTIHYSLRGGSV-SRSGTADHGSPTLY 513
A S ERSE S RR+VS S + + RR S+ G+ ++ GTAD G
Sbjct: 310 AGSGGKERSENLSLRRSVSELSLQGRRRRQQERRQQALSMAPGAADAQIGTADPGDFDQL 369
Query: 514 TPCRSQLPHSSGRP 555
T C Q P S RP
Sbjct: 370 TQCLIQAP--SNRP 381
>BC028614-1|AAH28614.1| 963|Homo sapiens Ras interacting protein 1
protein.
Length = 963
Score = 34.3 bits (75), Expect = 0.56
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 337 AASLDPERSERHSPRRAVSSCSNRRSHPGRHSRRTIHYSLRGGSV-SRSGTADHGSPTLY 513
A S ERSE S RR+VS S + + RR S+ G+ ++ GTAD G
Sbjct: 310 AGSGGKERSENLSLRRSVSELSLQGRRRRQQERRQQALSMAPGAADAQIGTADPGDFDQL 369
Query: 514 TPCRSQLPHSSGRP 555
T C Q P S RP
Sbjct: 370 TQCLIQAP--SNRP 381
>AY378097-1|AAR24580.1| 962|Homo sapiens Ras-interacting protein
protein.
Length = 962
Score = 34.3 bits (75), Expect = 0.56
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 337 AASLDPERSERHSPRRAVSSCSNRRSHPGRHSRRTIHYSLRGGSV-SRSGTADHGSPTLY 513
A S ERSE S RR+VS S + + RR S+ G+ ++ GTAD G
Sbjct: 310 AGSGGKERSENLSLRRSVSELSLQGRRRRQQERRQQALSMAPGAADAQIGTADPGDFDQL 369
Query: 514 TPCRSQLPHSSGRP 555
T C Q P S RP
Sbjct: 370 TQCLIQAP--SNRP 381
>BC056886-1|AAH56886.1| 392|Homo sapiens LUC7-like 2 (S.
cerevisiae) protein.
Length = 392
Score = 30.7 bits (66), Expect = 6.8
Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Frame = +1
Query: 298 KAHSALSLNR*CKAASLDPERSERHSPRRAVSSCSNRRSHP-GRHSR--RTIHYSLRGGS 468
+ H + S++R K + R +RH R SS S RSH RHS R+ S R S
Sbjct: 277 RRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSS 336
Query: 469 VSRSGTADHGSPTLYTPCRSQLPHSSGRPCLWRTRES 579
R D S R + P R R+ ES
Sbjct: 337 KERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYES 373
>BC050708-1|AAH50708.1| 392|Homo sapiens LUC7-like 2 (S.
cerevisiae) protein.
Length = 392
Score = 30.7 bits (66), Expect = 6.8
Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Frame = +1
Query: 298 KAHSALSLNR*CKAASLDPERSERHSPRRAVSSCSNRRSHP-GRHSR--RTIHYSLRGGS 468
+ H + S++R K + R +RH R SS S RSH RHS R+ S R S
Sbjct: 277 RRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSS 336
Query: 469 VSRSGTADHGSPTLYTPCRSQLPHSSGRPCLWRTRES 579
R D S R + P R R+ ES
Sbjct: 337 KERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYES 373
>BC042625-1|AAH42625.1| 391|Homo sapiens LUC7L2 protein protein.
Length = 391
Score = 30.7 bits (66), Expect = 6.8
Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Frame = +1
Query: 298 KAHSALSLNR*CKAASLDPERSERHSPRRAVSSCSNRRSHP-GRHSR--RTIHYSLRGGS 468
+ H + S++R K + R +RH R SS S RSH RHS R+ S R S
Sbjct: 276 RRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSS 335
Query: 469 VSRSGTADHGSPTLYTPCRSQLPHSSGRPCLWRTRES 579
R D S R + P R R+ ES
Sbjct: 336 KERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYES 372
>BC017163-1|AAH17163.1| 392|Homo sapiens LUC7-like 2 (S.
cerevisiae) protein.
Length = 392
Score = 30.7 bits (66), Expect = 6.8
Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Frame = +1
Query: 298 KAHSALSLNR*CKAASLDPERSERHSPRRAVSSCSNRRSHP-GRHSR--RTIHYSLRGGS 468
+ H + S++R K + R +RH R SS S RSH RHS R+ S R S
Sbjct: 277 RRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSS 336
Query: 469 VSRSGTADHGSPTLYTPCRSQLPHSSGRPCLWRTRES 579
R D S R + P R R+ ES
Sbjct: 337 KERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYES 373
>AK022895-1|BAB14297.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ12833 fis, clone NT2RP2003157, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 392
Score = 30.7 bits (66), Expect = 6.8
Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Frame = +1
Query: 298 KAHSALSLNR*CKAASLDPERSERHSPRRAVSSCSNRRSHP-GRHSR--RTIHYSLRGGS 468
+ H + S++R K + R +RH R SS S RSH RHS R+ S R S
Sbjct: 277 RRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSS 336
Query: 469 VSRSGTADHGSPTLYTPCRSQLPHSSGRPCLWRTRES 579
R D S R + P R R+ ES
Sbjct: 337 KERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYES 373
>AK001519-1|BAA91737.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ10657 fis, clone NT2RP2006043, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 392
Score = 30.7 bits (66), Expect = 6.8
Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Frame = +1
Query: 298 KAHSALSLNR*CKAASLDPERSERHSPRRAVSSCSNRRSHP-GRHSR--RTIHYSLRGGS 468
+ H + S++R K + R +RH R SS S RSH RHS R+ S R S
Sbjct: 277 RRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSS 336
Query: 469 VSRSGTADHGSPTLYTPCRSQLPHSSGRPCLWRTRES 579
R D S R + P R R+ ES
Sbjct: 337 KERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYES 373
>AK001476-1|BAA91713.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ10614 fis, clone NT2RP2005436, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 392
Score = 30.7 bits (66), Expect = 6.8
Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Frame = +1
Query: 298 KAHSALSLNR*CKAASLDPERSERHSPRRAVSSCSNRRSHP-GRHSR--RTIHYSLRGGS 468
+ H + S++R K + R +RH R SS S RSH RHS R+ S R S
Sbjct: 277 RRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSS 336
Query: 469 VSRSGTADHGSPTLYTPCRSQLPHSSGRPCLWRTRES 579
R D S R + P R R+ ES
Sbjct: 337 KERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYES 373
>AF151832-1|AAD34069.1| 402|Homo sapiens CGI-74 protein protein.
Length = 402
Score = 30.7 bits (66), Expect = 6.8
Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Frame = +1
Query: 298 KAHSALSLNR*CKAASLDPERSERHSPRRAVSSCSNRRSHP-GRHSR--RTIHYSLRGGS 468
+ H + S++R K + R +RH R SS S RSH RHS R+ S R S
Sbjct: 277 RRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSS 336
Query: 469 VSRSGTADHGSPTLYTPCRSQLPHSSGRPCLWRTRES 579
R D S R + P R R+ ES
Sbjct: 337 KERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYES 373
>AF151817-1|AAD34054.1| 383|Homo sapiens CGI-59 protein protein.
Length = 383
Score = 30.7 bits (66), Expect = 6.8
Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Frame = +1
Query: 298 KAHSALSLNR*CKAASLDPERSERHSPRRAVSSCSNRRSHP-GRHSR--RTIHYSLRGGS 468
+ H + S++R K + R +RH R SS S RSH RHS R+ S R S
Sbjct: 268 RRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSS 327
Query: 469 VSRSGTADHGSPTLYTPCRSQLPHSSGRPCLWRTRES 579
R D S R + P R R+ ES
Sbjct: 328 KERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYES 364
>AK098244-1|BAC05269.1| 584|Homo sapiens protein ( Homo sapiens
cDNA FLJ40925 fis, clone UTERU2006486. ).
Length = 584
Score = 30.3 bits (65), Expect = 9.0
Identities = 19/66 (28%), Positives = 27/66 (40%)
Frame = +1
Query: 385 AVSSCSNRRSHPGRHSRRTIHYSLRGGSVSRSGTADHGSPTLYTPCRSQLPHSSGRPCLW 564
A S S + HP H S S S + + SP+ T S++ SSG P +
Sbjct: 37 AAQSRSQPQLHPSAHPHPAAQSSSSDDSSSETEPSSRTSPSATTRPNSRIQTSSGTPSIL 96
Query: 565 RTREST 582
R S+
Sbjct: 97 EARPSS 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,311,049
Number of Sequences: 237096
Number of extensions: 2623969
Number of successful extensions: 6618
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6606
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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