Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_L17
         (351 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1ZSC6 Cluster: Serine/threonine protein kinases, putat...    35   0.33 
UniRef50_A5B4B9 Cluster: Putative uncharacterized protein; n=2; ...    34   0.58 
UniRef50_A5JSV2 Cluster: Moricin-like D; n=1; Galleria mellonell...    32   2.4  
UniRef50_A0DJW1 Cluster: Chromosome undetermined scaffold_53, wh...    32   3.1  
UniRef50_Q5E5E4 Cluster: Putative uncharacterized protein; n=1; ...    31   4.1  
UniRef50_Q5JXX7 Cluster: Transmembrane protein 31; n=2; Homo sap...    31   5.4  
UniRef50_Q6ANL0 Cluster: Putative uncharacterized protein; n=2; ...    30   9.5  

>UniRef50_A1ZSC6 Cluster: Serine/threonine protein kinases,
           putative; n=1; Microscilla marina ATCC 23134|Rep:
           Serine/threonine protein kinases, putative - Microscilla
           marina ATCC 23134
          Length = 970

 Score = 35.1 bits (77), Expect = 0.33
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +1

Query: 160 NFPTLLQTFDRNFRISLPTANHQ*QGYQYNN 252
           N+PT L+ F R+ RISL T N +     YNN
Sbjct: 208 NYPTALEFFQRSLRISLQTENQRIMALNYNN 238


>UniRef50_A5B4B9 Cluster: Putative uncharacterized protein; n=2;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 1127

 Score = 34.3 bits (75), Expect = 0.58
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +2

Query: 149 PLAIIFPP--FFRLLTGIFGSACPLQIINDRATSTTMKYLRKYIVDFILNNSKMF 307
           P +I+FP    F +   IFGS C ++ +    T    K L+K I DF+L ++ M+
Sbjct: 570 PYSILFPKKSLFPVEPRIFGSTCYVRDVRPSVTKLDPKALKKVIDDFLLISTSMW 624


>UniRef50_A5JSV2 Cluster: Moricin-like D; n=1; Galleria
           mellonella|Rep: Moricin-like D - Galleria mellonella
           (Wax moth)
          Length = 63

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = -1

Query: 273 MYFLKYFIVVLVALSLMICSGQADPKIPVXXXXXXXXXXXXXXKVLTAAGTAHEVYSHVR 94
           M F    ++V   ++LM+    A+PK                   L A GT  +VY HV+
Sbjct: 1   MKFFNLVLMVFAVVALMLNGTNAEPKGIGSALKKGGKIIKGGLGALGAIGTGQQVYEHVQ 60

Query: 93  NR 88
           NR
Sbjct: 61  NR 62


>UniRef50_A0DJW1 Cluster: Chromosome undetermined scaffold_53, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_53,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 505

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = +1

Query: 151 FGNNFPTLLQTFDRNFRISLPTANHQ*QGYQYNN 252
           F NNFP L Q  + N R    T+  Q Q  QYNN
Sbjct: 363 FPNNFPNLQQNQNTNPRFQSVTSGQQYQQQQYNN 396


>UniRef50_Q5E5E4 Cluster: Putative uncharacterized protein; n=1;
           Vibrio fischeri ES114|Rep: Putative uncharacterized
           protein - Vibrio fischeri (strain ATCC 700601 / ES114)
          Length = 664

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = -1

Query: 324 FNAGTPNILLLFKIKSTMYFLKYFIVVLVALSLMICSGQA 205
           F+  T +I +L KI+  +Y +K+ +  L+ALSL  C G +
Sbjct: 7   FDYKTAHIFILIKIE--LYIMKHILTALLALSLFGCGGDS 44


>UniRef50_Q5JXX7 Cluster: Transmembrane protein 31; n=2; Homo
           sapiens|Rep: Transmembrane protein 31 - Homo sapiens
           (Human)
          Length = 168

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = -1

Query: 315 GTPNILLLFKIKSTMYFLKYFIVVLVALSLMI 220
           G P IL LF + ST+YF K+F+  +++LS  I
Sbjct: 120 GLPIILHLFAL-STLYFYKFFLPTILSLSFFI 150


>UniRef50_Q6ANL0 Cluster: Putative uncharacterized protein; n=2;
           Desulfotalea psychrophila|Rep: Putative uncharacterized
           protein - Desulfotalea psychrophila
          Length = 110

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +2

Query: 71  INLVFPR-LRTWL*TSWAVPAAVRTLKPLAIIFPPFFRLLTGIFGS 205
           +++VFPR LR +  T W+ P  +R    +    P  FRL T ++ S
Sbjct: 12  LHIVFPRCLRLYTFTYWSTPGCLRLYTFVYCSTPGCFRLYTSVYCS 57


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 343,568,569
Number of Sequences: 1657284
Number of extensions: 6227420
Number of successful extensions: 14361
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14361
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11088517726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)