Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_L10
         (729 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.9  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   1.9  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   4.4  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   5.8  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 601 SLFVIIIHLYFYRLNLQAP*FQCRTSL*PIL 693
           S  VI+I ++F+  N+QA      + L PIL
Sbjct: 534 SFVVIVITIFFFTANVQAGELYFMSLLNPIL 564


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 601 SLFVIIIHLYFYRLNLQAP*FQCRTSL*PIL 693
           S  VI+I ++F+  N+QA      + L PIL
Sbjct: 259 SFVVIVITIFFFTANVQAGELYFMSLLNPIL 289


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 672 NFPITHSIACLPLPA 716
           N P+TH+IA  P P+
Sbjct: 335 NLPLTHNIAHNPYPS 349


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 632 FTG*TCKLLNFSVELPYNPFYSLPSFAS 715
           F+   C L+N++V      FY LP+ ++
Sbjct: 46  FSAWICALVNYNVSEISENFYYLPAMST 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,686
Number of Sequences: 336
Number of extensions: 3493
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)