Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_L10
(729 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81063-4|CAB02955.1| 209|Caenorhabditis elegans Hypothetical pr... 35 0.052
Z47068-6|CAA87334.2| 272|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL132859-1|CAB60494.1| 276|Caenorhabditis elegans Hypothetical ... 29 2.6
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 2.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 4.5
Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical p... 28 5.9
Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z49911-2|CAA90130.1| 681|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z49132-7|CAA88986.1| 403|Caenorhabditis elegans Hypothetical pr... 28 5.9
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 28 5.9
U51995-4|AAA96072.2| 317|Caenorhabditis elegans F-box a protein... 28 5.9
>Z81063-4|CAB02955.1| 209|Caenorhabditis elegans Hypothetical
protein F15D3.6 protein.
Length = 209
Score = 35.1 bits (77), Expect = 0.052
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -3
Query: 724 SXNAGKGRQAIEWVIGKFDTEIKELASSACKSTDELLSQTKKSIDDITTSA 572
S NA KGRQ +EWVI E + +++ E+ + +S ++S+
Sbjct: 148 SQNANKGRQGVEWVIDHLKKEYEAISTKVSSEVHEMSEKVLRSFGTTSSSS 198
>Z47068-6|CAA87334.2| 272|Caenorhabditis elegans Hypothetical
protein F15G9.5 protein.
Length = 272
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 127 ELDNYCVLCCGNI*HK 80
E DNYC LCCGN H+
Sbjct: 73 EEDNYCYLCCGNSEHQ 88
>AL132859-1|CAB60494.1| 276|Caenorhabditis elegans Hypothetical
protein Y39C12A.1 protein.
Length = 276
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -3
Query: 679 GKFDTEIKELASSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEKLT 506
G E E ++ KS EL +TKKS+ S D + ++ S L+++E ++
Sbjct: 212 GSSTRESSEKTTATLKSIKELNQETKKSVMTALESLGSGQDKVRAQLISILNNVETIS 269
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = -3
Query: 727 ISXNAGKGRQAIEWVIGKFDTEIKELA-----SSACKSTDELLSQTKKSIDDITTSARRS 563
+ + G + +E V+ K+ + + L ++ K+T E L++ +S D I +
Sbjct: 3186 LKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQLTKLAESSDKIDPQVAKD 3245
Query: 562 MDDISSKAKSTLDDIEK 512
+ D +KAK L +EK
Sbjct: 3246 IKDSKTKAKELLQALEK 3262
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = -3
Query: 727 ISXNAGKGRQAIEWVIGKFDTEIKELA-----SSACKSTDELLSQTKKSIDDITTSARRS 563
+ + G + +E V+ K+ + + L ++ K+T E L++ +S D I +
Sbjct: 5043 LKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQLTKLAESSDKIDPQVAKD 5102
Query: 562 MDDISSKAKSTLDDIEK 512
+ D +KAK L +EK
Sbjct: 5103 IKDSKTKAKELLQALEK 5119
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = -3
Query: 727 ISXNAGKGRQAIEWVIGKFDTEIKELA-----SSACKSTDELLSQTKKSIDDITTSARRS 563
+ + G + +E V+ K+ + + L ++ K+T E L++ +S D I +
Sbjct: 5946 LKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQLTKLAESSDKIDPQVAKD 6005
Query: 562 MDDISSKAKSTLDDIEK 512
+ D +KAK L +EK
Sbjct: 6006 IKDSKTKAKELLQALEK 6022
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = -3
Query: 727 ISXNAGKGRQAIEWVIGKFDTEIKELA-----SSACKSTDELLSQTKKSIDDITTSARRS 563
+ + G + +E V+ K+ + + L ++ K+T E L++ +S D I +
Sbjct: 6849 LKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQLTKLAESSDKIDPQVAKD 6908
Query: 562 MDDISSKAKSTLDDIEK 512
+ D +KAK L +EK
Sbjct: 6909 IKDSKTKAKELLQALEK 6925
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = -3
Query: 727 ISXNAGKGRQAIEWVIGKFDTEIKELA-----SSACKSTDELLSQTKKSIDDITTSARRS 563
+ + G + +E V+ K+ + + L ++ K+T E L++ +S D I +
Sbjct: 7752 LKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQLTKLAESSDKIDPQVAKD 7811
Query: 562 MDDISSKAKSTLDDIEK 512
+ D +KAK L +EK
Sbjct: 7812 IKDSKTKAKELLQALEK 7828
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Frame = -3
Query: 712 GKGRQAIEWVIGKFDTEIKELA-----SSACKSTDELLSQTKKSIDDITTSARRSMDDIS 548
G + +E V+ K+ + + L ++ K+T E L++ +S D I + + D
Sbjct: 4094 GNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQLTKLAESSDKIDPQVAKDIKDSK 4153
Query: 547 SKAKSTLDDIEK 512
+KAK L +EK
Sbjct: 4154 TKAKELLQALEK 4165
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 618 YYHKQRSQLMTSQHQQEDQ 562
YYH Q+ QL HQQ+ Q
Sbjct: 177 YYHNQQKQLQQQHHQQQQQ 195
>Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -3
Query: 643 SACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEK 512
SA T + +K DD +A+ + D K TLD ++K
Sbjct: 4 SAKHQTSDAGDSAEKHFDDAVDAAKDAYDSAKDKTSDTLDSVKK 47
>Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -3
Query: 643 SACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEK 512
SA T + +K DD +A+ + D K TLD ++K
Sbjct: 4 SAKHQTSDAGDSAEKHFDDAVDAAKDAYDSAKDKTSDTLDSVKK 47
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 634 KSTDELLSQTKKSIDDITTSARRSMDDISSK 542
K TD+ LS TKK + D+ S R++ + S+
Sbjct: 954 KKTDQELSDTKKHVQDLELSLRKAEQEKQSR 984
>Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -3
Query: 643 SACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEK 512
SA T + +K DD +A+ + D K TLD ++K
Sbjct: 4 SAKHQTSDAGDSAEKHFDDAVDAAKDAYDSAKDKTSDTLDSVKK 47
>Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -3
Query: 643 SACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEK 512
SA T + +K DD +A+ + D K TLD ++K
Sbjct: 4 SAKHQTSDAGDSAEKHFDDAVDAAKDAYDSAKDKTSDTLDSVKK 47
>Z49911-2|CAA90130.1| 681|Caenorhabditis elegans Hypothetical
protein M28.2 protein.
Length = 681
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = -3
Query: 676 KFDTEIKELASSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIEKLTKA 500
K E+KE+ K DE+ SQ+K + I SA S+DD + LD +++ KA
Sbjct: 303 KNSRELKEINDLIKKIKDEVESQSKGAAGAI-DSAEVSLDDTINSIVHFLDKLQQEVKA 360
>Z49132-7|CAA88986.1| 403|Caenorhabditis elegans Hypothetical
protein ZK666.7 protein.
Length = 403
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +3
Query: 498 LALVNFSISSSVLFALDEISSIDLLADVVMSSIDFFVCDNNSSVLLQAELASSLISVSNF 677
+ +V ++ ++V+ L++I+SID LAD+V ++ +S + E A L+ +F
Sbjct: 92 IGIVTYNRDATVVADLNKITSIDQLADIVFGALHKASSIADSYLHAGLEAADDLLQRQSF 151
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 634 KSTDELLSQTKKSIDDITTSARRSMDDISSK 542
K TD+ LS TKK + D+ S R++ + S+
Sbjct: 954 KKTDQELSDTKKHVQDLELSLRKAEQEKQSR 984
>U51995-4|AAA96072.2| 317|Caenorhabditis elegans F-box a protein
protein 53 protein.
Length = 317
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 395 WDTNEHGRSLVQSVFDICIAEACILLLFSAPLVGISFS*FFYIIKC 532
W+ EHG +V S+ E CIL++ L SF I+ C
Sbjct: 127 WNMTEHGCGIVSSLIQFLKPEKCILVM-EIELNKFSFDEVLTILPC 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,429,088
Number of Sequences: 27780
Number of extensions: 303400
Number of successful extensions: 823
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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