Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_L07
         (331 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    26   0.32 
AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding pr...    24   1.3  
AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding pr...    23   3.9  
U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    22   5.2  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           22   5.2  
AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    22   6.9  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    22   6.9  

>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -2

Query: 150 STSCDISIRFSGCCPHHLL 94
           STSC++++  +G  P+HLL
Sbjct: 834 STSCEVAVVLAGELPYHLL 852


>AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding
           protein AgamOBP33 protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = -3

Query: 155 GLVPPVISPYASP--AAVPITYSA 90
           GLVPPV     SP  AAV +T SA
Sbjct: 284 GLVPPVTLQLTSPGLAAVTLTLSA 307


>AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP29 protein.
          Length = 176

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 171 LRLYTRLSTSCDISIRFSGC 112
           L L  RL   CD S+RF  C
Sbjct: 137 LGLDNRLKDKCDYSMRFVTC 156


>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 167 VYTPGLVPPVISPYASPAAVPITYSALPSATYYV 66
           V T  +  P ++ YA+P A  I+Y+A  +   YV
Sbjct: 95  VATKVIAQPAVA-YAAPVAKTISYAAPVATKTYV 127


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +3

Query: 219  LRAWSGQRHGQQS 257
            + AW G+RHG+ +
Sbjct: 968  ISAWQGRRHGEMT 980


>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 297 RNKQHVQQILRFLRSV 250
           R++QH+  +L F+R V
Sbjct: 161 RDRQHIANLLEFIRIV 176


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = +3

Query: 219 LRAWSGQRHGQQSEENEEFVGHVVCF 296
           + AW+ ++HG+ +    +F+    CF
Sbjct: 868 IAAWTSRKHGEVNFYMTQFLSDHGCF 893


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 309,294
Number of Sequences: 2352
Number of extensions: 5858
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22910151
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)