Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_L03
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK023787-1|BAB14678.1|  858|Homo sapiens protein ( Homo sapiens ...    31   4.7  
BC098587-1|AAH98587.1| 1072|Homo sapiens FAM65A protein protein.       30   6.2  
BC068524-1|AAH68524.1|   76|Homo sapiens zinc finger protein 706...    30   6.2  
BC054512-1|AAH54512.1|  941|Homo sapiens FAM65A protein protein.       30   6.2  
BC015925-1|AAH15925.1|   76|Homo sapiens zinc finger protein 706...    30   6.2  
AK127792-1|BAC87139.1| 1223|Homo sapiens protein ( Homo sapiens ...    30   6.2  
AF275809-1|AAG23820.1|   76|Homo sapiens PNAS-113 protein.             30   6.2  
AB067517-1|BAB67823.1|  664|Homo sapiens KIAA1930 protein protein.     30   6.2  

>AK023787-1|BAB14678.1|  858|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13725 fis, clone PLACE3000009, weakly similar to
           DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT (EC
           2.7.7.6). ).
          Length = 858

 Score = 30.7 bits (66), Expect = 4.7
 Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = -2

Query: 466 PLCTRATPRVRMTSPAITKSSENQKGEKMSPGQTTDVKPT--SNVAVNRSTTTCTTQQSD 293
           P  T A+P    TSP  T +S   K   MSP  TT   P+  S V    S T  TT  + 
Sbjct: 247 PTHTTASPTHTSTSPTHTPTSPTHK-TSMSPPTTTSPTPSGMSLVQTATSPTHPTTSPTH 305

Query: 292 PIT 284
           P T
Sbjct: 306 PTT 308


>BC098587-1|AAH98587.1| 1072|Homo sapiens FAM65A protein protein.
          Length = 1072

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = -2

Query: 466 PLCTRATPRVRMTSPAITKSSENQKGEKMSPGQTTDVKPTSNVAVNRST--TTCTTQQSD 293
           P  T A+P    TSP  T +S   K   MSP  TT   P+    V  +T  T  TT  + 
Sbjct: 461 PTHTTASPTHTSTSPTHTPTSPTHK-TSMSPPTTTSPTPSGMGLVQTATSPTHPTTSPTH 519

Query: 292 PIT 284
           P T
Sbjct: 520 PTT 522


>BC068524-1|AAH68524.1|   76|Homo sapiens zinc finger protein 706
           protein.
          Length = 76

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -2

Query: 412 KSSENQKGEKMSPGQTTDVKPTSNVAVNRSTTTCTTQQSDPITWIRIFK 266
           K+++ Q G+K   G   D K  +  A+  + T C TQ  DP T+ + F+
Sbjct: 13  KNAKKQAGQKKKQGH--DQKAAAKAALIYTCTVCRTQMPDPKTFKQHFE 59


>BC054512-1|AAH54512.1|  941|Homo sapiens FAM65A protein protein.
          Length = 941

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = -2

Query: 466 PLCTRATPRVRMTSPAITKSSENQKGEKMSPGQTTDVKPTSNVAVNRST--TTCTTQQSD 293
           P  T A+P    TSP  T +S   K   MSP  TT   P+    V  +T  T  TT  + 
Sbjct: 330 PTHTTASPTHTSTSPTHTPTSPTHK-TSMSPPTTTSPTPSGMGLVQTATSPTHPTTSPTH 388

Query: 292 PIT 284
           P T
Sbjct: 389 PTT 391


>BC015925-1|AAH15925.1|   76|Homo sapiens zinc finger protein 706
           protein.
          Length = 76

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -2

Query: 412 KSSENQKGEKMSPGQTTDVKPTSNVAVNRSTTTCTTQQSDPITWIRIFK 266
           K+++ Q G+K   G   D K  +  A+  + T C TQ  DP T+ + F+
Sbjct: 13  KNAKKQAGQKKKQGH--DQKAAAKAALIYTCTVCRTQMPDPKTFKQHFE 59


>AK127792-1|BAC87139.1| 1223|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45893 fis, clone OCBBF3023543. ).
          Length = 1223

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = -2

Query: 466 PLCTRATPRVRMTSPAITKSSENQKGEKMSPGQTTDVKPTSNVAVNRST--TTCTTQQSD 293
           P  T A+P    TSP  T +S   K   MSP  TT   P+    V  +T  T  TT  + 
Sbjct: 612 PTHTTASPTHTSTSPTHTPTSPTHK-TSMSPPTTTSPTPSGMGLVQTATSPTHPTTSPTH 670

Query: 292 PIT 284
           P T
Sbjct: 671 PTT 673


>AF275809-1|AAG23820.1|   76|Homo sapiens PNAS-113 protein.
          Length = 76

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -2

Query: 412 KSSENQKGEKMSPGQTTDVKPTSNVAVNRSTTTCTTQQSDPITWIRIFK 266
           K+++ Q G+K   G   D K  +  A+  + T C TQ  DP T+ + F+
Sbjct: 13  KNAKKQAGQKKKQGH--DQKAAAKAALIYTCTVCRTQMPDPKTFKQHFE 59


>AB067517-1|BAB67823.1|  664|Homo sapiens KIAA1930 protein protein.
          Length = 664

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = -2

Query: 466 PLCTRATPRVRMTSPAITKSSENQKGEKMSPGQTTDVKPTSNVAVNRST--TTCTTQQSD 293
           P  T A+P    TSP  T +S   K   MSP  TT   P+    V  +T  T  TT  + 
Sbjct: 54  PTHTTASPTHTSTSPTHTPTSPTHK-TSMSPPTTTSPTPSGMGLVQTATSPTHPTTSPTH 112

Query: 292 PIT 284
           P T
Sbjct: 113 PTT 115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,935,349
Number of Sequences: 237096
Number of extensions: 1749129
Number of successful extensions: 4748
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4729
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)