Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_L03
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 32 0.41
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 32 0.41
Z46676-4|CAA86669.2| 822|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL032635-1|CAA21600.1| 382|Caenorhabditis elegans Hypothetical ... 30 1.2
AF173372-1|AAD51972.1| 822|Caenorhabditis elegans transmembrane... 30 1.2
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 2.2
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 2.2
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical ... 28 6.6
AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical ... 28 6.6
U97552-1|AAB52866.2| 109|Caenorhabditis elegans Hypothetical pr... 27 8.7
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 27 8.7
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 27 8.7
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF016683-2|AAB66194.1| 709|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 31.9 bits (69), Expect = 0.41
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = -2
Query: 466 PLCTRATPRVRMTSPAITKSSENQKGEKMSPGQTTDVKPTSNVAVNRSTTTCTTQQSDPI 287
P T TP T+P T ++ +P TT T+ A +TTT TT + P
Sbjct: 154 PTTTTTTPTTTTTTPTTTTTTPTT--TTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPT 211
Query: 286 T 284
T
Sbjct: 212 T 212
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/61 (27%), Positives = 23/61 (37%)
Frame = -2
Query: 466 PLCTRATPRVRMTSPAITKSSENQKGEKMSPGQTTDVKPTSNVAVNRSTTTCTTQQSDPI 287
P T TP T+P T + + TT PT+ +TTT T S+
Sbjct: 196 PTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETT 255
Query: 286 T 284
T
Sbjct: 256 T 256
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = -2
Query: 457 TRATPRVRMTSPAITKSSENQKGEKMSPGQTTDVKPTSNVAVNRSTTTCTTQQSDPIT 284
T TP T+P T ++ + T PT+ +TTT TT + P T
Sbjct: 77 TPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTT 134
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = -2
Query: 466 PLCTRATPRVRMTSPAITKSSENQKGEKMSPGQTTDVKPTSNVAVNRSTTTCTTQQSDPI 287
P T TP T+P T ++ +P TT T+ +TTT TT + P
Sbjct: 161 PTTTTTTPTTTTTTPTTTTTTPTT--TTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPT 218
Query: 286 T 284
T
Sbjct: 219 T 219
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = -2
Query: 466 PLCTRATPRVRMTSPAITKSSENQKGEKMSPGQTTDVKPTSNVAVNRSTTTCTTQQSDPI 287
P T TP T+P T ++ +P TT V T+ +TTT TT +
Sbjct: 182 PTTTTTTPTTTTTAPTTTTTTPTT--TTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTT 239
Query: 286 T 284
T
Sbjct: 240 T 240
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = -2
Query: 457 TRATPRVRMTSPAITKSSENQKGEKMSPGQTTDVKPTSNVAVNRSTTTCTTQQSDPIT 284
T TP T+P T ++E + +TT T+ +TTT TT + P T
Sbjct: 121 TTTTPTTTTTTPTTT-TTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTT 177
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = -2
Query: 466 PLCTRATPRVRMTSPAITKSSENQKGEKMSPGQTTDVKPTSNVAVNRSTTTCTTQQSDPI 287
P T TP T+P T ++ +P TT T+ +TT TT + P
Sbjct: 168 PTTTTTTPTTTTTTPTTTTTTPTT--TTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPT 225
Query: 286 T 284
T
Sbjct: 226 T 226
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = -2
Query: 466 PLCTRATPRVRMTSPAITKSSENQKGEKMS-PGQTTDVKPTSNVAVNRSTTTCTTQQSDP 290
P T TP T+P T ++ E + P T PT+ +TTT TT ++
Sbjct: 81 PTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTT-TTTTPTTTTTET 139
Query: 289 IT 284
T
Sbjct: 140 TT 141
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/75 (26%), Positives = 27/75 (36%), Gaps = 4/75 (5%)
Frame = -2
Query: 457 TRATPRVRMTSPAITKSSENQKGEKMSPGQT----TDVKPTSNVAVNRSTTTCTTQQSDP 290
T TP T+P T + E + T T KPT+ +T T TT +
Sbjct: 230 TTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTT 289
Query: 289 ITWIRIFKLTDLMMK 245
T + K T K
Sbjct: 290 TTTAKTTKSTTTTTK 304
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 31.9 bits (69), Expect = 0.41
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = -2
Query: 448 TPRVRMTSPAITKSSENQKGEKMSPGQTTDVKPTSNVAVNRSTTTCT--TQQSDPITWIR 275
T T P T S+ Q + P T+ + TS +TTT T T SD + W++
Sbjct: 270 TTSTTTTEPTTTTSTTTQTTTTV-PTSTSTISTTSTTTTTPTTTTTTTSTTTSDDLLWVK 328
Query: 274 I 272
I
Sbjct: 329 I 329
>Z46676-4|CAA86669.2| 822|Caenorhabditis elegans Hypothetical
protein C08B11.4 protein.
Length = 822
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 290 WIRLLCCTGGGGPIDGNIACWFDVSSLSG*HFFAFLI 400
W+ C TG GGP+D I W LS F A+L+
Sbjct: 703 WVVFACTTGNGGPVD-TILSWRLFVPLSKITFCAYLL 738
>AL032635-1|CAA21600.1| 382|Caenorhabditis elegans Hypothetical
protein Y51A2A.1 protein.
Length = 382
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = -2
Query: 460 CTRATPR--VRMTSPAITKSSENQKGEKMSPGQTTDVKPTSNVAVNRSTT-TCTTQQSDP 290
C R P V +T+P T +N E M T PT+ V ++ + T TT P
Sbjct: 61 CMRMVPPDDVSITTPVPTDDPDNPVTEPMVTDPTAPTAPTTEVPISSTATEPVTTAMPCP 120
Query: 289 ITWI 278
W+
Sbjct: 121 TDWM 124
>AF173372-1|AAD51972.1| 822|Caenorhabditis elegans transmembrane
protein NRF-6 protein.
Length = 822
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 290 WIRLLCCTGGGGPIDGNIACWFDVSSLSG*HFFAFLI 400
W+ C TG GGP+D I W LS F A+L+
Sbjct: 703 WVVFACTTGNGGPVD-TILSWRLFVPLSKITFCAYLL 738
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -2
Query: 457 TRATPRVRMTSPAITKSSENQKGEKMSPGQTTDVKPTSNVAVNRSTTTCTTQQSDPIT 284
T +T P+ T + + + TT KPT++ + + STTT TT + T
Sbjct: 586 TTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATT 643
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -2
Query: 457 TRATPRVRMTSPAITKSSENQKGEKMSPGQTTDVKPTSNVAVNRSTTTCTTQQSDPIT 284
T +T P+ T + + + TT KPT++ + + STTT TT + T
Sbjct: 586 TTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATT 643
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = -2
Query: 466 PLCTRATPRVRMTSPAITKSSENQKGEKMSPGQTTDVKPTSNVAVNRSTTTCTTQQS 296
PL T +T + S +T ++EN P +T +PTS + + +T+T ++ +S
Sbjct: 916 PLETASTSQ-STPSATLTSTTENIPSTSKIPETSTTQRPTSPILTSGATSTSSSTES 971
>AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical
protein C44E4.1a protein.
Length = 2712
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = -1
Query: 581 LNELIHKSPTAVFTRLNQPTTYTKTNIVTFSCLLRILFSTVHESYSPCKDDITRN 417
LN H S +V Q +Y T F CL L +V +S C D+ N
Sbjct: 1481 LNRYDHASEVSVVFHKPQNISYYSTGQSCFGCLCNQLLHSVALLHSSCDDENALN 1535
>AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical
protein C44E4.1c protein.
Length = 2710
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = -1
Query: 581 LNELIHKSPTAVFTRLNQPTTYTKTNIVTFSCLLRILFSTVHESYSPCKDDITRN 417
LN H S +V Q +Y T F CL L +V +S C D+ N
Sbjct: 1481 LNRYDHASEVSVVFHKPQNISYYSTGQSCFGCLCNQLLHSVALLHSSCDDENALN 1535
>U97552-1|AAB52866.2| 109|Caenorhabditis elegans Hypothetical
protein W05H7.2 protein.
Length = 109
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2
Query: 568 FTNLRLRCSPA*TNLQPILKPI*LHFLAFYGFYF 467
F LR +P+ +L IL LHFL F+ F+F
Sbjct: 3 FIATTLRNNPSAPSLAKILFNFFLHFLQFFSFFF 36
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/61 (26%), Positives = 22/61 (36%)
Frame = -2
Query: 466 PLCTRATPRVRMTSPAITKSSENQKGEKMSPGQTTDVKPTSNVAVNRSTTTCTTQQSDPI 287
P P T+P + + P TT T+ +TTT TT Q+ P
Sbjct: 649 PTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPT 708
Query: 286 T 284
T
Sbjct: 709 T 709
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/61 (26%), Positives = 22/61 (36%)
Frame = -2
Query: 466 PLCTRATPRVRMTSPAITKSSENQKGEKMSPGQTTDVKPTSNVAVNRSTTTCTTQQSDPI 287
P P T+P + + P TT T+ +TTT TT Q+ P
Sbjct: 705 PTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPT 764
Query: 286 T 284
T
Sbjct: 765 T 765
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/61 (26%), Positives = 22/61 (36%)
Frame = -2
Query: 466 PLCTRATPRVRMTSPAITKSSENQKGEKMSPGQTTDVKPTSNVAVNRSTTTCTTQQSDPI 287
P P T+P + + P TT T+ +TTT TT Q+ P
Sbjct: 528 PTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPT 587
Query: 286 T 284
T
Sbjct: 588 T 588
>AF016683-2|AAB66194.1| 709|Caenorhabditis elegans Hypothetical
protein K09F6.4 protein.
Length = 709
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 439 VRMTSPAITKSSENQKGEKMSPGQTTDVKPTSNVA 335
+ T+P ++ S +Q G+K S G T V+P NV+
Sbjct: 601 ITTTAPIVSSSDASQGGQKASGGSMT-VQPYQNVS 634
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,027,671
Number of Sequences: 27780
Number of extensions: 279964
Number of successful extensions: 1016
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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