Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_L03
(650 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 3.4
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 3.4
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 3.4
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 3.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 3.4
AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase pro... 22 5.9
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 7.8
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 7.8
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.6 bits (46), Expect = 3.4
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = -2
Query: 490 LAFYGFYFPLCTRATPRVRMTSPAITKSSENQKGE-KMSPGQTTDVKPTSNVAVNRSTTT 314
L + F PLC+ A + AIT +N +G + SP T+ + + T T
Sbjct: 190 LNIFPFDDPLCSFAIESISYEQTAITYVWKNDEGTLRKSPSLTS----LNAYLIKNQTIT 245
Query: 313 CTTQQS 296
C + S
Sbjct: 246 CPIKVS 251
Score = 21.8 bits (44), Expect = 5.9
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 290 WIRLLCCTGGGGPIDGNIACWFDVSSLSG*HFFAFL 397
W+ L C GGGG + ++ ++SL+ F L
Sbjct: 3 WVALGRCAGGGGRLSSVLS--LSLTSLASSLIFTIL 36
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.6 bits (46), Expect = 3.4
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = -2
Query: 490 LAFYGFYFPLCTRATPRVRMTSPAITKSSENQKGE-KMSPGQTTDVKPTSNVAVNRSTTT 314
L + F PLC+ A + AIT +N +G + SP T+ + + T T
Sbjct: 190 LNIFPFDDPLCSFAIESISYEQTAITYVWKNDEGTLRKSPSLTS----LNAYLIKNQTIT 245
Query: 313 CTTQQS 296
C + S
Sbjct: 246 CPIKVS 251
Score = 21.8 bits (44), Expect = 5.9
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 290 WIRLLCCTGGGGPIDGNIACWFDVSSLSG*HFFAFL 397
W+ L C GGGG + ++ ++SL+ F L
Sbjct: 3 WVALGRCAGGGGRLSSVLS--LSLTSLASSLIFTIL 36
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 3.4
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = -2
Query: 490 LAFYGFYFPLCTRATPRVRMTSPAITKSSENQKGE-KMSPGQTTDVKPTSNVAVNRSTTT 314
L + F PLC+ A + AIT +N +G + SP T+ + + T T
Sbjct: 241 LNIFPFDDPLCSFAIESISYEQTAITYVWKNDEGTLRKSPSLTS----LNAYLIKNQTIT 296
Query: 313 CTTQQS 296
C + S
Sbjct: 297 CPIKVS 302
Score = 21.8 bits (44), Expect = 5.9
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 290 WIRLLCCTGGGGPIDGNIACWFDVSSLSG*HFFAFL 397
W+ L C GGGG + ++ ++SL+ F L
Sbjct: 3 WVALGRCAGGGGRLSSVLS--LSLTSLASSLIFTIL 36
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.6 bits (46), Expect = 3.4
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = -2
Query: 490 LAFYGFYFPLCTRATPRVRMTSPAITKSSENQKGE-KMSPGQTTDVKPTSNVAVNRSTTT 314
L + F PLC+ A + AIT +N +G + SP T+ + + T T
Sbjct: 190 LNIFPFDDPLCSFAIESISYEQTAITYVWKNDEGTLRKSPSLTS----LNAYLIKNQTIT 245
Query: 313 CTTQQS 296
C + S
Sbjct: 246 CPIKVS 251
Score = 21.8 bits (44), Expect = 5.9
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 290 WIRLLCCTGGGGPIDGNIACWFDVSSLSG*HFFAFL 397
W+ L C GGGG + ++ ++SL+ F L
Sbjct: 3 WVALGRCAGGGGRLSSVLS--LSLTSLASSLIFTIL 36
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 323 HHHLYNTAV*SNH 285
HHHL +TAV +H
Sbjct: 148 HHHLQSTAVQDHH 160
>AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase
protein.
Length = 85
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +2
Query: 554 SEICESIHLNSL**VVLNTYWPS 622
+ +C S++L++L + + TY+PS
Sbjct: 26 NNMCTSLNLSNLFWLFVGTYFPS 48
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 88 FNYYVYNNSTKLNYTK 135
+N Y YNN+ NY K
Sbjct: 101 YNNYNYNNNNYNNYKK 116
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 91 NYYVYNNSTKLNYTKR 138
NY YNN+ NY K+
Sbjct: 329 NYNNYNNNNYNNYNKK 344
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,120
Number of Sequences: 438
Number of extensions: 3687
Number of successful extensions: 23
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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