Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_K21
         (442 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0225 + 26951993-26952165,26953169-26953567,26953644-269537...    28   3.8  
01_07_0342 - 42860548-42862343,42863345-42863396,42863666-428638...    27   6.7  
12_02_0980 - 25018107-25018469,25018792-25018938,25019028-25020110     27   8.8  

>02_05_0225 + 26951993-26952165,26953169-26953567,26953644-26953797,
            26954069-26954240,26954494-26954567,26954667-26954763,
            26954888-26955000,26955168-26955283,26955960-26956017,
            26956512-26956664,26957377-26957460,26957579-26957734,
            26958401-26958469,26959212-26959300,26959398-26959560,
            26959740-26959874,26959950-26960055,26960143-26960237,
            26960508-26960753,26961567-26961635,26961772-26961837,
            26961838-26961983,26962348-26962449,26962752-26962899,
            26964183-26964239,26964315-26964445,26964535-26964623,
            26964694-26965007,26965084-26965176,26966504-26966578,
            26966834-26966895,26967254-26967356,26967518-26967676,
            26967790-26967930,26967981-26968084,26968146-26968260,
            26969017-26969169,26969256-26969417
          Length = 1646

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 277  KISLIYYEDVYLYFSFSFCTSLYCCIVI 194
            KISLI  ED  +  +F +C +L  C+++
Sbjct: 1287 KISLIEIEDEMVSLNFEYCINLNACLMM 1314


>01_07_0342 -
           42860548-42862343,42863345-42863396,42863666-42863848,
           42864288-42864461,42864528-42864962
          Length = 879

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 286 NDERALASCKTSFRKCSIWQFHICVKCSLKC 378
           +D   L++  T + KC IW+  + V+ S+ C
Sbjct: 560 HDPFVLSALVTMYSKCGIWEDFVKVQMSVSC 590


>12_02_0980 - 25018107-25018469,25018792-25018938,25019028-25020110
          Length = 530

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 437 EFSRTSADMCTVSQLNMPLPHFRLH 363
           E+S  S    T++QLN+ L +F+LH
Sbjct: 479 EYSTGSLPQLTLNQLNLSLRNFKLH 503


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,415,336
Number of Sequences: 37544
Number of extensions: 164549
Number of successful extensions: 254
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 254
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 835800280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)