Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_K13
(819 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J04058-1|AAA52406.1| 333|Homo sapiens ETFA protein. 303 5e-82
BT009796-1|AAP88798.1| 333|Homo sapiens electron-transfer-flavo... 303 5e-82
BC095457-1|AAH95457.1| 333|Homo sapiens electron-transfer-flavo... 303 5e-82
BC015526-1|AAH15526.1| 333|Homo sapiens electron-transfer-flavo... 303 5e-82
AF436657-1|AAN03712.1| 333|Homo sapiens electron transfer flavo... 303 5e-82
AK096678-1|BAC04838.1| 738|Homo sapiens protein ( Homo sapiens ... 33 0.94
AB002340-1|BAA20800.3| 2467|Homo sapiens KIAA0342 protein protein. 33 0.94
>J04058-1|AAA52406.1| 333|Homo sapiens ETFA protein.
Length = 333
Score = 303 bits (744), Expect = 5e-82
Identities = 149/218 (68%), Positives = 177/218 (81%)
Frame = -2
Query: 818 AFGKXVLPRVAAKLDVSPITDIIGIKDANTFVRTIYAGNAILTLEAKDPIKVITVRGTAF 639
AFGK +LPRVAAKL+V+PI+DII IK +TFVRTIYAGNA+ T++ + +KV +VRGT+F
Sbjct: 114 AFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSF 173
Query: 638 PAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKSDRPELTSAKNIVSGGRGLKSGDNFK 459
A GGSA+ +KA ++ E+L Q+LTKSDRPELT AK +VSGGRGLKSG+NFK
Sbjct: 174 DAAATSGGSASSEKASSTS-PVEISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENFK 232
Query: 458 LLYDLADKLNXXXXXXXXXXXXGFVPNDLQIGQTGKIVAPDLYIAVGISGAIQHLAGMKD 279
LLYDLAD+L+ GFVPND+Q+GQTGKIVAP+LYIAVGISGAIQHLAGMKD
Sbjct: 233 LLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKD 292
Query: 278 SKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTSKL 165
SKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+T L
Sbjct: 293 SKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330
>BT009796-1|AAP88798.1| 333|Homo sapiens
electron-transfer-flavoprotein, alpha polypeptide
(glutaric aciduria II) protein.
Length = 333
Score = 303 bits (744), Expect = 5e-82
Identities = 149/218 (68%), Positives = 177/218 (81%)
Frame = -2
Query: 818 AFGKXVLPRVAAKLDVSPITDIIGIKDANTFVRTIYAGNAILTLEAKDPIKVITVRGTAF 639
AFGK +LPRVAAKL+V+PI+DII IK +TFVRTIYAGNA+ T++ + +KV +VRGT+F
Sbjct: 114 AFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSF 173
Query: 638 PAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKSDRPELTSAKNIVSGGRGLKSGDNFK 459
A GGSA+ +KA ++ E+L Q+LTKSDRPELT AK +VSGGRGLKSG+NFK
Sbjct: 174 DAAATSGGSASSEKASSTS-PVEISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENFK 232
Query: 458 LLYDLADKLNXXXXXXXXXXXXGFVPNDLQIGQTGKIVAPDLYIAVGISGAIQHLAGMKD 279
LLYDLAD+L+ GFVPND+Q+GQTGKIVAP+LYIAVGISGAIQHLAGMKD
Sbjct: 233 LLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKD 292
Query: 278 SKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTSKL 165
SKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+T L
Sbjct: 293 SKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330
>BC095457-1|AAH95457.1| 333|Homo sapiens
electron-transfer-flavoprotein, alpha polypeptide
(glutaric aciduria II) protein.
Length = 333
Score = 303 bits (744), Expect = 5e-82
Identities = 149/218 (68%), Positives = 177/218 (81%)
Frame = -2
Query: 818 AFGKXVLPRVAAKLDVSPITDIIGIKDANTFVRTIYAGNAILTLEAKDPIKVITVRGTAF 639
AFGK +LPRVAAKL+V+PI+DII IK +TFVRTIYAGNA+ T++ + +KV +VRGT+F
Sbjct: 114 AFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSF 173
Query: 638 PAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKSDRPELTSAKNIVSGGRGLKSGDNFK 459
A GGSA+ +KA ++ E+L Q+LTKSDRPELT AK +VSGGRGLKSG+NFK
Sbjct: 174 DAAATSGGSASSEKASSTS-PVEISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENFK 232
Query: 458 LLYDLADKLNXXXXXXXXXXXXGFVPNDLQIGQTGKIVAPDLYIAVGISGAIQHLAGMKD 279
LLYDLAD+L+ GFVPND+Q+GQTGKIVAP+LYIAVGISGAIQHLAGMKD
Sbjct: 233 LLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKD 292
Query: 278 SKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTSKL 165
SKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+T L
Sbjct: 293 SKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330
>BC015526-1|AAH15526.1| 333|Homo sapiens
electron-transfer-flavoprotein, alpha polypeptide
(glutaric aciduria II) protein.
Length = 333
Score = 303 bits (744), Expect = 5e-82
Identities = 149/218 (68%), Positives = 177/218 (81%)
Frame = -2
Query: 818 AFGKXVLPRVAAKLDVSPITDIIGIKDANTFVRTIYAGNAILTLEAKDPIKVITVRGTAF 639
AFGK +LPRVAAKL+V+PI+DII IK +TFVRTIYAGNA+ T++ + +KV +VRGT+F
Sbjct: 114 AFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSF 173
Query: 638 PAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKSDRPELTSAKNIVSGGRGLKSGDNFK 459
A GGSA+ +KA ++ E+L Q+LTKSDRPELT AK +VSGGRGLKSG+NFK
Sbjct: 174 DAAATSGGSASSEKASSTS-PVEISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENFK 232
Query: 458 LLYDLADKLNXXXXXXXXXXXXGFVPNDLQIGQTGKIVAPDLYIAVGISGAIQHLAGMKD 279
LLYDLAD+L+ GFVPND+Q+GQTGKIVAP+LYIAVGISGAIQHLAGMKD
Sbjct: 233 LLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKD 292
Query: 278 SKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTSKL 165
SKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+T L
Sbjct: 293 SKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330
>AF436657-1|AAN03712.1| 333|Homo sapiens electron transfer
flavoprotein alpha-subunit protein.
Length = 333
Score = 303 bits (744), Expect = 5e-82
Identities = 149/218 (68%), Positives = 177/218 (81%)
Frame = -2
Query: 818 AFGKXVLPRVAAKLDVSPITDIIGIKDANTFVRTIYAGNAILTLEAKDPIKVITVRGTAF 639
AFGK +LPRVAAKL+V+PI+DII IK +TFVRTIYAGNA+ T++ + +KV +VRGT+F
Sbjct: 114 AFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSF 173
Query: 638 PAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKSDRPELTSAKNIVSGGRGLKSGDNFK 459
A GGSA+ +KA ++ E+L Q+LTKSDRPELT AK +VSGGRGLKSG+NFK
Sbjct: 174 DAAATSGGSASSEKASSTS-PVEISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENFK 232
Query: 458 LLYDLADKLNXXXXXXXXXXXXGFVPNDLQIGQTGKIVAPDLYIAVGISGAIQHLAGMKD 279
LLYDLAD+L+ GFVPND+Q+GQTGKIVAP+LYIAVGISGAIQHLAGMKD
Sbjct: 233 LLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKD 292
Query: 278 SKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTSKL 165
SKTIVAINKDPEAPIFQV+DYG+VADLFK VPE+T L
Sbjct: 293 SKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 330
>AK096678-1|BAC04838.1| 738|Homo sapiens protein ( Homo sapiens
cDNA FLJ39359 fis, clone PEBLM2004290. ).
Length = 738
Score = 33.5 bits (73), Expect = 0.94
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = -3
Query: 712 MLVTLY*PLRPKILSRSSLFVVQHSLQSRWREGLQQLIKHLRATIRL 572
ML L + K++ + + +Q W +GLQ+ +KHL+ +I+L
Sbjct: 11 MLKKLSSKVMTKVIKKKIILAIQQLGNGEWTQGLQKRLKHLKGSIQL 57
>AB002340-1|BAA20800.3| 2467|Homo sapiens KIAA0342 protein protein.
Length = 2467
Score = 33.5 bits (73), Expect = 0.94
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = -3
Query: 712 MLVTLY*PLRPKILSRSSLFVVQHSLQSRWREGLQQLIKHLRATIRL 572
ML L + K++ + + +Q W +GLQ+ +KHL+ +I+L
Sbjct: 340 MLKKLSSKVMTKVIKKKIILAIQQLGNGEWTQGLQKRLKHLKGSIQL 386
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,801,825
Number of Sequences: 237096
Number of extensions: 2141374
Number of successful extensions: 4622
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4614
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10203625794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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