Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_K13
         (819 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81130-12|CAB61027.1|  332|Caenorhabditis elegans Hypothetical p...   297   5e-81
Z79695-8|CAB01967.2|  332|Caenorhabditis elegans Hypothetical pr...   297   5e-81
Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical pr...    29   5.3  
Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical pr...    28   7.0  
U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical pr...    28   7.0  
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    28   7.0  
U10402-7|AAA19069.1|  192|Caenorhabditis elegans C. elegans neur...    28   9.2  
AC006780-1|AAF60644.2|   89|Caenorhabditis elegans Hypothetical ...    28   9.2  

>Z81130-12|CAB61027.1|  332|Caenorhabditis elegans Hypothetical
           protein F27D4.1 protein.
          Length = 332

 Score =  297 bits (730), Expect = 5e-81
 Identities = 146/219 (66%), Positives = 178/219 (81%), Gaps = 1/219 (0%)
 Frame = -2

Query: 818 AFGKXVLPRVAAKLDVSPITDIIGIKDANTFVRTIYAGNAILTLEAKDPIKVITVRGTAF 639
           AFG+ V+PRVAAKLDVS I+D+  +  A++F RT+YAGNA+  +++  PIK++T RGT+F
Sbjct: 115 AFGRGVIPRVAAKLDVSSISDVTEVHSADSFTRTLYAGNAVKKVKSTAPIKLLTFRGTSF 174

Query: 638 -PAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKSDRPELTSAKNIVSGGRGLKSGDNF 462
            PA+  EGGS A++ AP  D KTDL EFL QEL+KS+RP+L +AK +VSGGRGLKSGDNF
Sbjct: 175 EPAK--EGGSGAVENAPSADIKTDLSEFLGQELSKSERPDLATAKVVVSGGRGLKSGDNF 232

Query: 461 KLLYDLADKLNXXXXXXXXXXXXGFVPNDLQIGQTGKIVAPDLYIAVGISGAIQHLAGMK 282
           KL+YDLADKL             G+VPND+Q+GQTGKIVAP+LYIA+GISGAIQHLAGMK
Sbjct: 233 KLIYDLADKLGAGVGASRAAVDAGYVPNDMQVGQTGKIVAPELYIAIGISGAIQHLAGMK 292

Query: 281 DSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTSKL 165
           DSK IVAINKDP+APIFQV+D GL ADLFKAVPELT+ L
Sbjct: 293 DSKVIVAINKDPDAPIFQVADIGLKADLFKAVPELTAAL 331


>Z79695-8|CAB01967.2|  332|Caenorhabditis elegans Hypothetical
           protein F27D4.1 protein.
          Length = 332

 Score =  297 bits (730), Expect = 5e-81
 Identities = 146/219 (66%), Positives = 178/219 (81%), Gaps = 1/219 (0%)
 Frame = -2

Query: 818 AFGKXVLPRVAAKLDVSPITDIIGIKDANTFVRTIYAGNAILTLEAKDPIKVITVRGTAF 639
           AFG+ V+PRVAAKLDVS I+D+  +  A++F RT+YAGNA+  +++  PIK++T RGT+F
Sbjct: 115 AFGRGVIPRVAAKLDVSSISDVTEVHSADSFTRTLYAGNAVKKVKSTAPIKLLTFRGTSF 174

Query: 638 -PAEPLEGGSAAIDKAPEGDYKTDLVEFLKQELTKSDRPELTSAKNIVSGGRGLKSGDNF 462
            PA+  EGGS A++ AP  D KTDL EFL QEL+KS+RP+L +AK +VSGGRGLKSGDNF
Sbjct: 175 EPAK--EGGSGAVENAPSADIKTDLSEFLGQELSKSERPDLATAKVVVSGGRGLKSGDNF 232

Query: 461 KLLYDLADKLNXXXXXXXXXXXXGFVPNDLQIGQTGKIVAPDLYIAVGISGAIQHLAGMK 282
           KL+YDLADKL             G+VPND+Q+GQTGKIVAP+LYIA+GISGAIQHLAGMK
Sbjct: 233 KLIYDLADKLGAGVGASRAAVDAGYVPNDMQVGQTGKIVAPELYIAIGISGAIQHLAGMK 292

Query: 281 DSKTIVAINKDPEAPIFQVSDYGLVADLFKAVPELTSKL 165
           DSK IVAINKDP+APIFQV+D GL ADLFKAVPELT+ L
Sbjct: 293 DSKVIVAINKDPDAPIFQVADIGLKADLFKAVPELTAAL 331


>Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical protein
            F21G4.6 protein.
          Length = 1885

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +1

Query: 475  DFKPRPPDTIFLALVSSGLSD 537
            +FKP  P++I L LVSSGLS+
Sbjct: 1588 EFKPGEPESIALKLVSSGLSN 1608


>U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical
           protein C27A2.5 protein.
          Length = 188

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +3

Query: 594 CFINCCRPSLQRLCRECCT 650
           C   CCRP     CR CCT
Sbjct: 83  CGCCCCRPKCCCCCRRCCT 101


>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +3

Query: 594 CFINCCRPSLQRLCRECCT 650
           C   CCRP     CR CCT
Sbjct: 84  CGCCCCRPRCCCCCRRCCT 102


>Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical
           protein T01B7.8 protein.
          Length = 164

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +3

Query: 594 CFINCCRPSLQRLCRECCT 650
           C   CCRP     CR CCT
Sbjct: 82  CGCCCCRPRCCCCCRRCCT 100


>U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical
           protein C04G6.10 protein.
          Length = 166

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +3

Query: 594 CFINCCRPSLQRLCRECCT 650
           C   CCRP     CR CCT
Sbjct: 83  CGCCCCRPRCCCCCRRCCT 101


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +3

Query: 594 CFINCCRPSLQRLCRECCT 650
           C   CCRP     CR CCT
Sbjct: 84  CGCCCCRPRCCCCCRRCCT 102


>U10402-7|AAA19069.1|  192|Caenorhabditis elegans C. elegans neuro d
           homolog protein1 protein.
          Length = 192

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 395 HRQLHERHPRPHSTY 439
           H QLH  HP PHS++
Sbjct: 127 HHQLHPSHPPPHSSF 141


>AC006780-1|AAF60644.2|   89|Caenorhabditis elegans Hypothetical
           protein Y47D9A.4 protein.
          Length = 89

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -2

Query: 620 GGSAAIDKAPEGDYKTDLVEFLKQELTKSDRPELT 516
           GGS  I  + E D   D  + + + L K D+PE T
Sbjct: 51  GGSRGIKSSKEPDSTDDAFKEMAKRLAKKDKPEKT 85


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,369,041
Number of Sequences: 27780
Number of extensions: 345382
Number of successful extensions: 964
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)