Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_K12
         (729 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1063 + 24024030-24024506,24024803-24024856,24024965-240251...    33   0.23 
11_03_0150 + 10810322-10810380,10810530-10810593,10810803-108110...    30   1.6  
01_06_1513 - 37884198-37884485,37884966-37886951,37886976-378873...    29   2.9  
06_03_0899 - 25776159-25776797,25776898-25777806,25779425-257795...    28   6.6  
08_01_0048 + 335868-336682,338382-340386                               28   8.7  

>08_02_1063 +
           24024030-24024506,24024803-24024856,24024965-24025118,
           24025314-24025388,24025511-24025788,24026023-24026253,
           24026522-24026620,24026740-24026889,24027830-24027976,
           24028525-24028575,24028647-24028819,24029018-24029147,
           24029361-24029458,24029655-24029892,24030634-24030837,
           24031003-24031083,24031296-24031535
          Length = 959

 Score = 33.1 bits (72), Expect = 0.23
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 520 LSKYSSPFVGTSFNCTSGLILKHGDTISKLSSSSFIVF 633
           L+  ++  VGTS   T GL+L+ GD + K S    IVF
Sbjct: 565 LATPTAVLVGTSLGATRGLLLRGGDILEKFSEVDAIVF 602


>11_03_0150 +
           10810322-10810380,10810530-10810593,10810803-10811047,
           10811627-10811747,10811821-10811895,10811986-10812112,
           10812194-10812939,10813065-10813195,10813547-10813636,
           10814000-10814105
          Length = 587

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -2

Query: 590 PCFKISPDVQLKEVPTNGEEYLLKVIKERKNIAAVTKCNKDYS 462
           P  K  P     +  TNG  +  K++ E K  A   K N+DYS
Sbjct: 161 PSAKEIPSSSKVQSKTNGHHHKQKIVNEAKRKAEALKDNRDYS 203


>01_06_1513 -
           37884198-37884485,37884966-37886951,37886976-37887305,
           37887397-37887471,37887543-37887734,37887922-37888173,
           37888248-37888803,37888881-37889088,37889624-37889736,
           37890029-37890060,37890545-37890619
          Length = 1368

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = -2

Query: 575 SPDVQLKEVPTNGEEYLLKVIKERKNIAAVTKCNKDYSKFAEN 447
           SPD+ L+ +P+   E L ++ +E   +  + +C++  S  A N
Sbjct: 543 SPDLSLENLPSKQNEVLTEISEEPATLDGMLECSRSGSSQASN 585


>06_03_0899 -
           25776159-25776797,25776898-25777806,25779425-25779592,
           25779703-25779890,25779993-25780137,25780566-25780775
          Length = 752

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 602 DIVSPCFKISPDVQLKEVPTNGEEYLLKVIKE 507
           ++VSP  K+  D+    +P+NG E+   V+KE
Sbjct: 113 EVVSP--KVESDLSAMNIPSNGSEWAELVVKE 142


>08_01_0048 + 335868-336682,338382-340386
          Length = 939

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +1

Query: 517 TLSKYSSPFVGTSFNCTSGLILKHGDTISKLSSS 618
           TL+KY    +G  F+CT+ + + H   I+++ SS
Sbjct: 207 TLAKYVYDKIGHQFDCTAFVSVSHKPDITRILSS 240


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,980,296
Number of Sequences: 37544
Number of extensions: 268465
Number of successful extensions: 465
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)