Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_K10
(735 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884 42 4e-04
03_01_0248 - 1932992-1933423,1933440-1933489,1933558-1933606,193... 42 5e-04
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 38 0.011
03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049 37 0.019
03_04_0016 + 16461542-16461566,16462701-16462732,16463015-164631... 36 0.033
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 36 0.033
07_03_1580 + 27888275-27888360,27888755-27888871,27888964-278890... 36 0.044
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 35 0.058
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 34 0.10
10_08_0807 - 20712066-20712290,20712750-20713339,20713415-207134... 33 0.24
10_06_0131 - 11066033-11066251,11066548-11067012,11067102-110681... 32 0.41
10_02_0035 - 4429737-4429781,4430769-4430890,4431000-4431297,443... 32 0.54
02_02_0661 - 12731005-12731238,12732756-12732884,12732969-127331... 31 1.3
01_01_1176 - 9372879-9373097,9373814-9374278,9374372-9375447,937... 29 3.8
04_03_1007 - 21670780-21671368,21671477-21671685 29 5.1
10_01_0110 + 1360699-1360873,1361301-1361524 28 6.7
09_06_0354 - 22490833-22491417 28 6.7
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 28 8.8
>03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884
Length = 225
Score = 42.3 bits (95), Expect = 4e-04
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 10/89 (11%)
Frame = -2
Query: 680 FYPQVFAGAPADKAK---NE-KVQEALQLLDKFLEGQKYVAGPNLTVADLS------LIA 531
F PQ+ PAD+A+ NE K+Q+ L + D+ L KY+AG T+ADLS I
Sbjct: 123 FAPQL--NIPADEARIAENERKLQQMLNVYDEILAKNKYLAGDEFTLADLSHLPNSHYIV 180
Query: 530 SVSSLEASDIDFKKYANVKRWYETVKSTA 444
+ S + F +V RWYE + + A
Sbjct: 181 NARSPRGKKL-FTSKKHVARWYEEISNRA 208
>03_01_0248 -
1932992-1933423,1933440-1933489,1933558-1933606,
1933688-1933840
Length = 227
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Frame = -2
Query: 641 AKNEK-VQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYA---NVK 474
A+NEK +Q+ L + D+ L +Y+AG T+ADLS + + + +S+ K + NV
Sbjct: 141 AENEKKLQQVLNVYDEILSKNEYLAGDEFTLADLSHLPNSHYIVSSERGRKLFTGRKNVA 200
Query: 473 RWYETV 456
RWY+ +
Sbjct: 201 RWYDQI 206
>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 37.5 bits (83), Expect = 0.011
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Frame = -2
Query: 674 PQVFAGAPADKAKNE---KVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASD 504
P +F P +K E K+++ L++ + L KY+AG ++VADLS +A L A+
Sbjct: 121 PMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGTVCLGATP 180
Query: 503 --IDFKKYANVKRWY 465
Y +VK W+
Sbjct: 181 HASVLDAYPHVKAWW 195
>03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049
Length = 319
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = -2
Query: 647 DKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEA---SDIDFKKYANV 477
+K+K + +++ L + ++ LE Y+AG T+ADLS + + L + S F+ NV
Sbjct: 192 EKSKKD-LEKLLDIYEQRLEEAAYLAGDKFTIADLSHLPNADRLASDPRSRRMFEARKNV 250
Query: 476 KRWYETVKS 450
RW+ + S
Sbjct: 251 SRWWNNISS 259
>03_04_0016 +
16461542-16461566,16462701-16462732,16463015-16463100,
16463189-16463305,16463399-16463474,16463695-16463818,
16464482-16464595,16464700-16464947
Length = 273
Score = 35.9 bits (79), Expect = 0.033
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = -2
Query: 635 NEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETV 456
N + LQ LD++L + Y++G + D+++ S+ S A+ Y NV RWY+ +
Sbjct: 26 NVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAAS-----YVNVTRWYDHI 80
Query: 455 KS 450
+
Sbjct: 81 SA 82
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 35.9 bits (79), Expect = 0.033
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Frame = -2
Query: 692 FSDYFYPQVFAGAPADKAKNE---KVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVS 522
F + P GA NE K+++AL++ + L KY+AG +++AD+S +V
Sbjct: 115 FQCFIVPMFMGGATDIGVVNESLEKLKKALEVYEAQLSKSKYLAGDFISLADISHFPTVY 174
Query: 521 SLEAS--DIDFKKYANVKRWYETV 456
L AS + Y VK W + V
Sbjct: 175 YLLASAHASVLEAYPRVKAWIDDV 198
>07_03_1580 +
27888275-27888360,27888755-27888871,27888964-27889045,
27889710-27889821,27889958-27890071,27890163-27890326
Length = 224
Score = 35.5 bits (78), Expect = 0.044
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = -2
Query: 620 EALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETV 456
+ L+ L++ L G+ YV+G ++ D+ + A+V S ++ + N RWY+TV
Sbjct: 12 DGLKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAE-----FPNAARWYDTV 61
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 35.1 bits (77), Expect = 0.058
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = -2
Query: 629 KVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDID--FKKYANVKRWYETV 456
K+++ L + + L G +Y+AG +++ADLS +++ A++ Y +VK W+E +
Sbjct: 141 KLEKVLGVYEARLSGSRYLAGDRISLADLSHFSNMRYFMATEYAGVVDAYPHVKAWWEAL 200
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -2
Query: 632 EKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDID--FKKYANVKRWYET 459
EK+++ L+ + L G +Y+AG L+ ADL+ A+ F Y +VK W+E
Sbjct: 141 EKLKKVLETYEARLSGSRYLAGDFLSFADLNHFPFTFYFMATPCASLFDAYPHVKAWWEG 200
Query: 458 VKS 450
+ S
Sbjct: 201 LMS 203
>10_08_0807 -
20712066-20712290,20712750-20713339,20713415-20713463,
20713669-20713821
Length = 338
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = -2
Query: 635 NEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFK---KYANVKRWY 465
++++ + L + ++ LE +Y+AG T+ADLS + + L A + NV RW+
Sbjct: 194 SKELSKVLDIYEQRLEEAEYLAGDKFTLADLSHLPNADRLAADPRTLRMLQSRRNVSRWW 253
Query: 464 ETV 456
V
Sbjct: 254 ADV 256
>10_06_0131 -
11066033-11066251,11066548-11067012,11067102-11068177,
11068269-11068422,11068511-11068601,11069016-11069152
Length = 713
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = -2
Query: 617 ALQLLDKFLEGQKYVAGPNLTVADLSL---IASVSSLEASDIDFKKYANVKRWYETVKS 450
A +D +L + ++ G LT+AD+++ +A + S KKY N+ RW+ + S
Sbjct: 96 ACSFVDGYLMSRTFLVGHVLTIADITVWSNLAGIGQRWESLRKSKKYQNLVRWFNGIDS 154
>10_02_0035 -
4429737-4429781,4430769-4430890,4431000-4431297,
4431644-4431682
Length = 167
Score = 31.9 bits (69), Expect = 0.54
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -1
Query: 663 CRCPSRQSQEREGPGSPSAAGQVPRRSEVRGRTEPHRRRLESHRQCLQPGS 511
C +R S +R+G +P +G RRS GR + R+ E C QP S
Sbjct: 48 CGAAARGSSDRQGAAAPRGSGVEQRRSGWPGR-QARGRQQEEQVSCEQPRS 97
>02_02_0661 -
12731005-12731238,12732756-12732884,12732969-12733193,
12733302-12733478,12733576-12733788
Length = 325
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -2
Query: 653 PADKAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSL-EASDIDFKKYANV 477
P D+A ++ EAL ++ L Q+Y+ G LT AD+ L ++ E + FK +
Sbjct: 202 PYDEAVT-RLYEALDKCEEILSRQRYICGNQLTEADVRLFVTLIRFDEVYAVHFKCNKRL 260
Query: 476 KRWY 465
R Y
Sbjct: 261 LREY 264
>01_01_1176 -
9372879-9373097,9373814-9374278,9374372-9375447,
9375534-9375687,9375783-9375879,9376238-9376374
Length = 715
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = -2
Query: 623 QEALQLLDKFLEGQKYVAGPNLTVADL---SLIASVSSLEASDIDFKKYANVKRWYETV 456
+ A LD +L + ++ L++AD+ S +A S KKY N+ RW+ ++
Sbjct: 96 EAACSFLDGYLASRTFLVSYGLSIADIVVWSNLAGTGQRWESLRRSKKYQNLVRWFNSI 154
>04_03_1007 - 21670780-21671368,21671477-21671685
Length = 265
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = -2
Query: 644 KAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVK--- 474
K E++ + L ++ L KY+AG + AD I ++ + D+D ++Y N +
Sbjct: 161 KQSEEELSKLLDDVEAQLNNGKYLAGDEFSPADSVFIPILARITLLDLD-EEYINCRPRL 219
Query: 473 RWYETVKSTAPGYQEA 426
Y T+ P Y+ A
Sbjct: 220 LEYYTLVKQRPSYKVA 235
>10_01_0110 + 1360699-1360873,1361301-1361524
Length = 132
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 654 PSRQSQEREGPGSPSAAGQVPRRSEVRGRTEPHRRRLESHRQCL 523
P Q + R +G+ R V+GR P RR+ E HR+ L
Sbjct: 23 PEAQEESRAVAAEAHCSGRRLGRCRVQGRASPQRRQ-EPHRRAL 65
>09_06_0354 - 22490833-22491417
Length = 194
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 645 QSQEREGPGSPSAAGQVPRRSEVRGRTEPHRRR 547
QSQE + P P AA ++ GR RRR
Sbjct: 67 QSQETQDPNEPKAAAAKKKKRAGHGRKRSRRRR 99
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -2
Query: 632 EKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDID--FKKYANVKRWYE 462
EK+++ L++ + L Y+AG L+ DLS A+ KY +VK W++
Sbjct: 141 EKLKKVLEVYEARLSQNTYLAGNFLSFVDLSHFPFTFYFMATPYASLLDKYPHVKAWWD 199
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,714,052
Number of Sequences: 37544
Number of extensions: 313530
Number of successful extensions: 908
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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