Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_K09
         (592 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4ANZ4 Cluster: Putative uncharacterized protein; n=1; ...    33   5.0  
UniRef50_A4SYA8 Cluster: Putative transmembrane protein; n=1; Po...    33   6.6  
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    32   8.7  

>UniRef50_Q4ANZ4 Cluster: Putative uncharacterized protein; n=1;
           Chlorobium phaeobacteroides BS1|Rep: Putative
           uncharacterized protein - Chlorobium phaeobacteroides
           BS1
          Length = 412

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -3

Query: 527 YRVLRSYYFKMTALLQWSDRLNH-VLIRNKRKSLYVFF 417
           YR L+  +F   A L W D LNH ++I +    LY +F
Sbjct: 169 YRTLKKEFFSSLAKLSWLDLLNHPMIIPDSNNPLYPYF 206


>UniRef50_A4SYA8 Cluster: Putative transmembrane protein; n=1;
           Polynucleobacter sp. QLW-P1DMWA-1|Rep: Putative
           transmembrane protein - Polynucleobacter sp.
           QLW-P1DMWA-1
          Length = 323

 Score = 32.7 bits (71), Expect = 6.6
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -3

Query: 518 LRSYYFKMTALLQWSDRLNHVLIRNKRKSLYVFFLLFL*ASDHTAMMMVS 369
           L + +   T +  WSD  NHVL    R +L  FF L    S    +M+++
Sbjct: 168 LHTLHHSQTVMTAWSDNRNHVLDDIMRTTLMAFFALLFGVSPGQFIMLIA 217


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 16/29 (55%), Positives = 18/29 (62%)
 Frame = +2

Query: 359 DGNHSPSS*PYDRLPTRIIKKKRISSXVY 445
           DGNHSPS  PY  LPTR  K K  S  ++
Sbjct: 3   DGNHSPSGRPYASLPTR-AKMKLTSLFIF 30


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,884,924
Number of Sequences: 1657284
Number of extensions: 9249876
Number of successful extensions: 17532
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17488
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)