Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_K09
         (592 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   1.8  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    25   2.4  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -1

Query: 370 VVTVTRELQQYQGQSQPTRSRLIAYVD*SV 281
           V  VTR +Q + G  +  +SRL+AYV  SV
Sbjct: 818 VAAVTRLMQNHSGP-RTAKSRLLAYVAESV 846


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
 Frame = +3

Query: 66  PFTTIHTYRSNAYKNIKCTFVILLILHFTIYIM----NYIIARIKIYLPVFLTKVNDY 227
           P   I  Y  +   N +     +L++  T+++     +YI+ R+KIYL    T +N Y
Sbjct: 352 PVQQIQLYSRSRVANSQIKVTKMLLIVSTVFVCLNLPSYIV-RVKIYLETEHTNMNIY 408


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,214
Number of Sequences: 2352
Number of extensions: 10653
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)