Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_K05
(518 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0970 + 21338072-21338074,21338192-21338240,21338688-213389... 143 9e-35
02_04_0177 + 20669053-20669055,20669150-20669198,20669680-206699... 143 9e-35
01_07_0270 - 42417782-42417850,42418207-42418342,42418826-424191... 136 8e-33
01_07_0054 - 40779336-40779599,40779734-40779848,40779998-407801... 31 0.73
05_03_0634 + 16432679-16433076,16433358-16433610,16433993-164342... 30 0.97
01_07_0185 + 41854199-41855069,41855177-41855610 30 1.3
03_01_0167 + 1374578-1375243,1375895-1376277,1377947-1378007,137... 29 3.0
03_02_0157 + 6008840-6008908,6009795-6009932,6010921-6011014,601... 28 3.9
01_01_0972 + 7672048-7672390,7672546-7672709,7672864-7672961,767... 28 3.9
12_02_1222 + 27145264-27148287 28 5.2
12_02_0020 - 12388777-12389062,12389637-12389818 28 5.2
11_06_0221 - 21387365-21387652,21387892-21389952,21390360-21390395 27 6.8
09_04_0560 - 18519024-18519145,18519330-18519435,18519671-185199... 27 9.0
09_03_0062 - 11969719-11970036,11970115-11970843 27 9.0
08_02_1418 - 26931896-26932339,26932435-26932668,26932805-269331... 27 9.0
02_02_0063 + 6481568-6481570,6481922-6482470 27 9.0
>04_03_0970 +
21338072-21338074,21338192-21338240,21338688-21338970,
21339570-21339705,21339761-21339769
Length = 159
Score = 143 bits (346), Expect = 9e-35
Identities = 69/125 (55%), Positives = 92/125 (73%), Gaps = 3/125 (2%)
Frame = -3
Query: 468 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQF 289
M++PK+NR I +YLF+EGV+ AKKDY+ KH +++ +PNLQVIK MQS KS+ YV+E F
Sbjct: 1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQID-VPNLQVIKLMQSFKSKEYVRETF 59
Query: 288 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRT--ETVRRGPVG-RPDAPARSAE 118
+W+++YWYLTN+GIE+LR +L+LP EIVPATLK+S R GP G RP P R
Sbjct: 60 SWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEG 119
Query: 117 DRSAY 103
DR +
Sbjct: 120 DRPRF 124
>02_04_0177 +
20669053-20669055,20669150-20669198,20669680-20669962,
20670526-20670661,20671014-20671094
Length = 183
Score = 143 bits (346), Expect = 9e-35
Identities = 69/125 (55%), Positives = 92/125 (73%), Gaps = 3/125 (2%)
Frame = -3
Query: 468 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQF 289
M++PK+NR I +YLF+EGV+ AKKDY+ KH +++ +PNLQVIK MQS KS+ YV+E F
Sbjct: 1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQID-VPNLQVIKLMQSFKSKEYVRETF 59
Query: 288 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRT--ETVRRGPVG-RPDAPARSAE 118
+W+++YWYLTN+GIE+LR +L+LP EIVPATLK+S R GP G RP P R
Sbjct: 60 SWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEG 119
Query: 117 DRSAY 103
DR +
Sbjct: 120 DRPRF 124
>01_07_0270 -
42417782-42417850,42418207-42418342,42418826-42419108,
42419459-42419507,42419614-42419616
Length = 179
Score = 136 bits (330), Expect = 8e-33
Identities = 65/125 (52%), Positives = 90/125 (72%), Gaps = 3/125 (2%)
Frame = -3
Query: 468 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQF 289
M++ K+NR I +YLF EGV+ AKKDY+ KH +++ +PNL+VIK MQS KS+ YV+E F
Sbjct: 1 MIISKKNRREICKYLFHEGVLYAKKDYNLAKHPKVD-VPNLEVIKLMQSFKSKEYVRETF 59
Query: 288 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR--TETVRRGPVG-RPDAPARSAE 118
+W+H+YWYLTN+GIE+LR +L+LP E+VP TLK+S + + GP G RP P R
Sbjct: 60 SWQHYYWYLTNDGIEHLRSYLNLPSEVVPNTLKKSAKPPSRPFGSGPPGDRPRGPPRFEG 119
Query: 117 DRSAY 103
DR +
Sbjct: 120 DRPRF 124
>01_07_0054 -
40779336-40779599,40779734-40779848,40779998-40780181,
40780322-40780393,40780485-40780611,40780830-40781011,
40781099-40781249
Length = 364
Score = 30.7 bits (66), Expect = 0.73
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = -3
Query: 438 IYEYLFKEGVMVA-KKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYL 262
+Y+ L ++G +VA KK + P H + ++ L I+ + GY +E Y Y+
Sbjct: 84 VYKGLLQDGTIVAIKKRHSPPSHEFIHEVNYLSSIRHRNLVNLLGYCQENGMQMLVYEYV 143
Query: 261 TNEGIE-YLRIFLHLP 217
N + +L H P
Sbjct: 144 PNGSVSTHLHGSSHAP 159
>05_03_0634 +
16432679-16433076,16433358-16433610,16433993-16434291,
16434553-16434729,16435001-16435621,16435690-16435784,
16436000-16436088,16436185-16436250,16436475-16437026,
16437879-16437953,16438305-16438375,16438456-16438513,
16441506-16442048
Length = 1098
Score = 30.3 bits (65), Expect = 0.97
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Frame = -3
Query: 339 IKAMQSLKSRGYVKEQFAWRH---FYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTET 169
I + L S G WR F+ YLT E I YL +HL + +T RS+ +
Sbjct: 605 ISSNAQLDSPGSANSSPFWRQVEPFFSYLTTEDIAYLSQQIHLSDD---STASRSIEGDE 661
Query: 168 VRRGP-----VGRPDAPARSAED 115
R+ + +P PA S +D
Sbjct: 662 SRKYKGSLEYISQPSTPAGSNKD 684
>01_07_0185 + 41854199-41855069,41855177-41855610
Length = 434
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = +1
Query: 13 PPLNSRSAEPGPTSAFLS*GATPGVSRSTSVCRSVLSRAGWGIRTTNRATAYCLCTY*AL 192
PP R A G L+ G P VSR+T C S + G G+ A C +Y +
Sbjct: 63 PPRRERGAARGKAMV-LADGGGPFVSRAT--CSSAMRGLGRGLGLRGGAAHACPYSYCSF 119
Query: 193 KC 198
KC
Sbjct: 120 KC 121
>03_01_0167 +
1374578-1375243,1375895-1376277,1377947-1378007,
1378721-1379386
Length = 591
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +2
Query: 23 IQDQLSLDQHQPFYHEVQHQGSAGVRLYADLSSAERAGASG 145
I D L D + +H+ QH G GV L L G G
Sbjct: 478 IMDHLDFDAYDDSHHQQQHGGFGGVSLTLGLQQHGSHGGGG 518
>03_02_0157 +
6008840-6008908,6009795-6009932,6010921-6011014,
6011313-6011361,6015190-6015265,6015466-6015558,
6015786-6015851
Length = 194
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = -3
Query: 231 FLHLPPEI---VPATLKRSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPADPWCCTS 67
F+ PPE +P+ R +R E ++R +PD P R A +A DP C ++
Sbjct: 97 FVVKPPEKKHRLPSAYNRFMREE-IQRIKAAKPDIPHREAFSMAAKNWAKCDPRCSST 153
>01_01_0972 +
7672048-7672390,7672546-7672709,7672864-7672961,
7673040-7673361,7674021-7675220
Length = 708
Score = 28.3 bits (60), Expect = 3.9
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = -3
Query: 504 FLC*VSLQAAFKMLMPKQNRVAIYEYLFKEGVMVAK--KDYHAPKHTELEKIPNLQVIKA 331
FL V+ + F L + + Y+ ++ G VA +H PK K+ + A
Sbjct: 152 FLFLVTFSSLFCTLPLRNTMIVDYKLIYPSGSAVAGIVNSFHTPKGATKAKLQ----VNA 207
Query: 330 MQSLKSRGYVKEQFAWRHFYWYLT 259
M KS V FAW F W+ T
Sbjct: 208 M--FKS---VAGSFAWAFFQWFYT 226
>12_02_1222 + 27145264-27148287
Length = 1007
Score = 27.9 bits (59), Expect = 5.2
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +2
Query: 71 VQHQGSAGVRLYADLSSAERAGASGRPTGPRRTVSVRTERL-SVAGTISGGRCKNILK 241
V+H A S+A A P+ RRT SVR S GT+S R N++K
Sbjct: 708 VKHITRTRAAAAAARSTAASAAMLRSPSAARRTASVRCREFDSEVGTLSSIRHVNVVK 765
>12_02_0020 - 12388777-12389062,12389637-12389818
Length = 155
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 153 VGRPDAPARSAEDRSAYRRTPADP 82
+GRP R E+RS +RTP+ P
Sbjct: 47 IGRPKGEGREWEERSRSQRTPSPP 70
>11_06_0221 - 21387365-21387652,21387892-21389952,21390360-21390395
Length = 794
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -3
Query: 204 PATLKRSVRTETVRRG-PVGRPDAPARSAEDRSAYRRTPADPWC 76
P+ + R + + + RG P R AP RSA R P DP C
Sbjct: 111 PSVVARLMGLDALPRGAPDERDAAPCGGELRRSASERVPRDPAC 154
>09_04_0560 -
18519024-18519145,18519330-18519435,18519671-18519907,
18521371-18521810,18523215-18525012
Length = 900
Score = 27.1 bits (57), Expect = 9.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 169 CLCTY*ALKCCRHNFRRKVQEYSQVFNTLIG 261
CL Y +LK R+ ++ QE++ +F+ L G
Sbjct: 804 CLPAYPSLKVTRNQLQKITQEHASIFHILSG 834
>09_03_0062 - 11969719-11970036,11970115-11970843
Length = 348
Score = 27.1 bits (57), Expect = 9.0
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 246 QYPHWLGTSKSASRQ 290
Q+PHWLGT+ AS++
Sbjct: 172 QHPHWLGTAGYASKE 186
>08_02_1418 -
26931896-26932339,26932435-26932668,26932805-26933110,
26933462-26933644,26934386-26934493
Length = 424
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 202 RHNFRRKVQEYSQVFNTLIG*VPVKVPPGKLFFDITSGLE 321
R+NFR KV+E S F + +G PP K+ D+ G++
Sbjct: 314 RNNFRAKVKEDSATFPSSLGMGRALSPP-KMSVDLEMGMK 352
>02_02_0063 + 6481568-6481570,6481922-6482470
Length = 183
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = -3
Query: 165 RRGPVGRPDAPARSAEDRSAYRRTPAD 85
RRGP GRP APA + R RR P D
Sbjct: 157 RRGPAGRP-APAEAVRTRRR-RRGPRD 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,841,542
Number of Sequences: 37544
Number of extensions: 281092
Number of successful extensions: 830
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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