Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_J16
(602 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 176 2e-45
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 151 6e-38
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 151 1e-37
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 137 1e-33
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 120 2e-28
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 105 7e-24
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 90 2e-19
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 67 2e-12
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 53 4e-08
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 30 0.30
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 2.8
SPAC1F7.03 |pkd2||TRP-like ion channel |Schizosaccharomyces pomb... 26 4.9
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 6.4
SPMIT.07 |atp6||F0-ATPase subunit 6|Schizosaccharomyces pombe|ch... 25 6.4
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 25 8.5
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 25 8.5
SPCC757.03c |||ThiJ domain protein|Schizosaccharomyces pombe|chr... 25 8.5
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 176 bits (429), Expect = 2e-45
Identities = 87/137 (63%), Positives = 97/137 (70%)
Frame = -2
Query: 601 GLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRSIYGER 422
GLFGKTVPKT ENF LA +G GY+GS FHRVI NFMIQ G+SIYG R
Sbjct: 46 GLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSR 105
Query: 421 FEDXNFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 242
F D NFKL H G LSMANAG D+NGSQFFITTVKTPWLDG HVVFG+VL G D+V+KI
Sbjct: 106 FPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKI 165
Query: 241 EMTVTGANDRPVKDVVI 191
T D+P++DV I
Sbjct: 166 SKAETDNRDKPLEDVKI 182
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 151 bits (367), Expect = 6e-38
Identities = 77/138 (55%), Positives = 90/138 (65%)
Frame = -2
Query: 598 LFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRSIYGERF 419
LF VPKT NF L +G GY GS FHRVI FM+Q G+SIYGE+F
Sbjct: 22 LFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKF 81
Query: 418 EDXNFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 239
D NF LKH G LSMANAG +TNGSQFFITTV TPWLDG+HVVFG+V EGMDVV+K+E
Sbjct: 82 PDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVE 141
Query: 238 MTVTGANDRPVKDVVISD 185
G+N + ++ D
Sbjct: 142 S--LGSNSGATRARIVID 157
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 151 bits (365), Expect = 1e-37
Identities = 87/162 (53%), Positives = 102/162 (62%), Gaps = 8/162 (4%)
Frame = -2
Query: 598 LFGKTVPKTTENFFQLAQKPEGEG----YKGSKFHRVIKNFMIQXXXXXXXXXXXGRSIY 431
LF VPKT +NF L E +G YKGS+FHRVIKNFM+Q G SIY
Sbjct: 23 LFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIY 82
Query: 430 GERFEDXNFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVV 251
GE+FED NF+LKH LSMANAG +TNGSQFFITTV TP LDG+HVVFGKV++G V
Sbjct: 83 GEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTV 142
Query: 250 QKIEMTVTGANDRPVKDVVISD----TKTEVVAEPFSVTKES 137
+ IE T ND PV VVI + TK ++ A VT +S
Sbjct: 143 RTIENLET-KNDDPVVPVVIEECGTCTKDQIEAPKPDVTGDS 183
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 137 bits (331), Expect = 1e-33
Identities = 76/145 (52%), Positives = 89/145 (61%), Gaps = 9/145 (6%)
Frame = -2
Query: 598 LFGKTVPKTTENFFQLA--------QKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXG 443
LF VPKT ENF Q QKP G YK S FHR+I+ FMIQ
Sbjct: 25 LFSSIVPKTAENFRQFCTGETLGVNQKPIG--YKNSTFHRIIQGFMIQGGDFVSGDGTGS 82
Query: 442 RSIYGER-FEDXNFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLE 266
+I+ R F D NF LKH G LSMANAGKD+NG QFFITTV +LDG+HVVFG+V+E
Sbjct: 83 ATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIE 142
Query: 265 GMDVVQKIEMTVTGANDRPVKDVVI 191
G D+V++IE T GAN RP +V I
Sbjct: 143 GYDIVKEIESTPVGANSRPKSNVAI 167
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 120 bits (288), Expect = 2e-28
Identities = 63/137 (45%), Positives = 89/137 (64%), Gaps = 1/137 (0%)
Frame = -2
Query: 598 LFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRSIYGERF 419
L+ + PKT +NF+ LA+ EG Y G FHRVI +F+IQ SIYG++F
Sbjct: 17 LYTEHAPKTCQNFYTLAK--EGY-YDGVIFHRVIPDFVIQGGDPTGTGRGGT-SIYGDKF 72
Query: 418 EDX-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 242
+D + L H GAG LSMANAG +TN SQFFIT TPWLDG+H +FG+V+ G+ V +++
Sbjct: 73 DDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRM 132
Query: 241 EMTVTGANDRPVKDVVI 191
+ T ++DRP++ + I
Sbjct: 133 GLIRTDSSDRPIEPLKI 149
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 105 bits (251), Expect = 7e-24
Identities = 60/137 (43%), Positives = 78/137 (56%), Gaps = 1/137 (0%)
Frame = -2
Query: 598 LFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRSIYGERF 419
L+ + PK +NF A E Y + FHR+IKNFMIQ SI+ + F
Sbjct: 470 LYPEEAPKAVQNFTTHA---ENGYYDNTIFHRIIKNFMIQGGDPLGDGTGG-ESIWKKDF 525
Query: 418 EDX-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 242
ED + LKH +SMAN+G +TNGSQFFITT TPWLDG+H +F + G+DVV +I
Sbjct: 526 EDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRI 585
Query: 241 EMTVTGANDRPVKDVVI 191
E T DRP++ I
Sbjct: 586 EQGETDKYDRPLEPTKI 602
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 90.2 bits (214), Expect = 2e-19
Identities = 55/148 (37%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Frame = -2
Query: 580 PKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRSIYGERFEDXNFK 401
P NF QLA++ Y+ + FHR I FMIQ +SI+G+ F+D
Sbjct: 297 PHAVYNFVQLAKQGY---YRNTIFHRNIARFMIQGGDPSGTGRGG-QSIWGKPFKDEFCN 352
Query: 400 -LKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTG 224
LKH G +SMAN GK+TNGSQFFI LD +H +FG+V+ G++V+ +E T
Sbjct: 353 PLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTN 412
Query: 223 ANDRPVKDVVISDTKTEVVAEPFSVTKE 140
+ND P + + D + +PF K+
Sbjct: 413 SNDHPKLPIKLED--IIIFVDPFEEWKK 438
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 66.9 bits (156), Expect = 2e-12
Identities = 55/154 (35%), Positives = 75/154 (48%), Gaps = 2/154 (1%)
Frame = -2
Query: 598 LFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRSIYGERF 419
L+ K VPK NF QL EG Y G+ HRV+ F+IQ SIYGE F
Sbjct: 28 LWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTGTGMGG-ESIYGEPF 83
Query: 418 E-DXNFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVL-EGMDVVQK 245
+ + +L+ G + MA + N SQFFIT TP +G+ +FG+V+ + + V +
Sbjct: 84 AVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVVGDTIYNVVR 143
Query: 244 IEMTVTGANDRPVKDVVISDTKTEVVAEPFSVTK 143
I AN RPV I TEV+ F+ K
Sbjct: 144 ISELELDANQRPVFPPKI--ISTEVIDNYFTDIK 175
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 52.8 bits (121), Expect = 4e-08
Identities = 49/163 (30%), Positives = 74/163 (45%), Gaps = 15/163 (9%)
Frame = -2
Query: 598 LFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRSIY---- 431
LF K PKT ENF +L + + Y F+ + N+ Q GR ++
Sbjct: 16 LFVKEAPKTCENFLKLCKL---KYYNFCPFYNIQHNYTCQTGDPLGPTGDGGRCVWNVLN 72
Query: 430 -GERF--EDXNFKLKHYGAGWLSMANA---GKDTN----GSQFFIT-TVKTPWLDGRHVV 284
G RF + N L H G +SM+ A +D GSQF IT + LD R+ +
Sbjct: 73 KGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDNLEGLDERYPI 132
Query: 283 FGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDTKTEVVAEPF 155
+G+V EG D + KI + +P +D+ I T ++ +PF
Sbjct: 133 YGQVAEGFDTLLKINDAICDEEGQPYRDIRIK--HTIILDDPF 173
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 29.9 bits (64), Expect = 0.30
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 150 TLKGSATTSVFVSDITTSLTGRSFAPVTVISIFCTTSIPSKTLPKTT 290
+L TT+V+V+++ T G PVT SIF T + + T +T+
Sbjct: 460 SLHYKTTTTVWVTEVFTRYLGDDSTPVTSSSIFSTATEATDTSVQTS 506
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.6 bits (56), Expect = 2.8
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +3
Query: 162 SATTSVFVSDITTSLTGRSFAPVTVISIFCT--TSIP---SKTLPKTTCLP 299
+++TS+ + +TS T + +P+ S CT TSIP + T P T +P
Sbjct: 256 TSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVP 306
Score = 25.0 bits (52), Expect = 8.5
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 162 SATTSVFVSDITTSLTGRSFAPVTVISIFCTTS 260
+++TS+ + +TS T + +P+ S CTTS
Sbjct: 200 TSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTS 232
>SPAC1F7.03 |pkd2||TRP-like ion channel |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 710
Score = 25.8 bits (54), Expect = 4.9
Identities = 15/65 (23%), Positives = 30/65 (46%)
Frame = -2
Query: 304 LDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISDTKTEVVAEPFSVTKESAH*I 125
L G H + G+ L +D + I TV + ++ SDT T++ T ++ +
Sbjct: 109 LSGSHTLTGEALSILDSIPSIAYTVPDLDAVVTINIYESDTNTQLAC--VRTTVQNGRSV 166
Query: 124 YNKCL 110
Y++ +
Sbjct: 167 YHRAV 171
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 6.4
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 144 FVTLKGSATTSVFVSDITTSLTGRSFAPVTVISIFCTTSIPSKT 275
+ T S+ S+F T S T +PV+ S T+ +PS T
Sbjct: 75 YATPTSSSEPSIFSESATPSETNSYSSPVSSYSDPATSQLPSST 118
>SPMIT.07 |atp6||F0-ATPase subunit 6|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 257
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 135 LTKFIINVLMINIFMRMHLLDFYVIFIYHY 46
L FII L I + + + LL+F + FI Y
Sbjct: 211 LITFIIGFLPITVLVAISLLEFGIAFIQAY 240
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.0 bits (52), Expect = 8.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 440 APSSSITLGKITTLDHEIFNYSVELAPFVPLPLRFLS*LKEVLSCLR 580
+PSS + L K+ LDH + + S P P +++ K+ S L+
Sbjct: 186 SPSSLVPLLKLPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLK 232
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -2
Query: 298 GRHVVFGKVLE-GMDVVQKIEMTVTGANDRPVKDVV 194
GR +V V+E G+D+VQ+ + A ++ V+DV+
Sbjct: 929 GRSMVEKLVVEYGLDIVQRSMYGIQAAAEKAVRDVL 964
>SPCC757.03c |||ThiJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 244
Score = 25.0 bits (52), Expect = 8.5
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -2
Query: 331 FITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGA-NDRPVKDV 197
F+ K+P +GR VV+GK + + ++ M V+ A +R ++D+
Sbjct: 147 FVDDTKSP--EGRSVVYGKKVTAFNSTGELVMGVSSALRERNMQDL 190
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,307,385
Number of Sequences: 5004
Number of extensions: 43897
Number of successful extensions: 131
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 264253462
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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