Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_J16
(602 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 175 2e-44
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 161 4e-40
09_06_0359 + 22508900-22509439 144 6e-35
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 141 3e-34
02_01_0160 + 1116160-1116678 136 1e-32
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 136 1e-32
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 132 2e-31
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 124 5e-29
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 120 7e-28
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 114 6e-26
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 114 6e-26
10_01_0309 + 3417602-3418147 112 2e-25
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 104 6e-23
06_01_0214 + 1634171-1634173,1634263-1634742 101 3e-22
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 95 3e-20
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 80 1e-15
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 76 2e-14
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 73 2e-13
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 65 5e-11
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 51 6e-07
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 49 3e-06
02_01_0086 + 613113-613532 48 8e-06
01_01_0077 - 585670-585787,585921-586687 40 0.001
08_02_0053 + 11721658-11721689,11721960-11722710 39 0.003
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 38 0.005
06_01_1095 + 8984363-8984789,8985175-8985416,8985500-8985622,898... 29 2.8
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 175 bits (426), Expect = 2e-44
Identities = 86/139 (61%), Positives = 99/139 (71%)
Frame = -2
Query: 601 GLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRSIYGER 422
GL+G VP+T ENF L +G GYKGS FHRVIK+FMIQ G+SIYG
Sbjct: 105 GLYGDDVPQTAENFRALCTGEKGFGYKGSSFHRVIKDFMIQGGDFDKGNGTGGKSIYGRT 164
Query: 421 FEDXNFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 242
F+D NFKL H G G +SMANAG +TNGSQFFI TVKTPWLDGRHVVFG+V+EGMD+V+ I
Sbjct: 165 FKDENFKLVHTGPGVVSMANAGPNTNGSQFFICTVKTPWLDGRHVVFGQVIEGMDIVKMI 224
Query: 241 EMTVTGANDRPVKDVVISD 185
E T DRP K VVIS+
Sbjct: 225 ESQETDRGDRPKKKVVISE 243
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 161 bits (391), Expect = 4e-40
Identities = 86/147 (58%), Positives = 97/147 (65%), Gaps = 7/147 (4%)
Frame = -2
Query: 601 GLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXXXXXXG 443
GLFGKTVPKT ENF L +G G +KGS FHR+I +FMIQ G
Sbjct: 70 GLFGKTVPKTAENFRALCTGEKGTGKSGKALHFKGSAFHRIIPSFMIQGGDFTLGDGRGG 129
Query: 442 RSIYGERFEDXNFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEG 263
SIYG +F D NFK+KH G G LSMANAG+DTNGSQFFITTV T WLDG+HVVFGKVL G
Sbjct: 130 ESIYGTKFADENFKIKHTGPGLLSMANAGRDTNGSQFFITTVTTSWLDGKHVVFGKVLSG 189
Query: 262 MDVVQKIEMTVTGANDRPVKDVVISDT 182
MDVV KIE + P VVI+D+
Sbjct: 190 MDVVYKIEAEGQQSGS-PKSKVVIADS 215
>09_06_0359 + 22508900-22509439
Length = 179
Score = 144 bits (348), Expect = 6e-35
Identities = 77/145 (53%), Positives = 92/145 (63%), Gaps = 7/145 (4%)
Frame = -2
Query: 598 LFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXXXXXXGR 440
LF TVPKT ENF L +G G YKGS FHR+I NFM Q G
Sbjct: 26 LFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRIIPNFMCQGGDFTRGNGTGGE 85
Query: 439 SIYGERFEDXNFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 260
SIYG+RF D NFKL+H G G LSMANAG +TNGSQFFI T +T WLDG+HVVFGKV++G
Sbjct: 86 SIYGDRFADENFKLRHTGPGVLSMANAGPNTNGSQFFICTTRTTWLDGKHVVFGKVVDGY 145
Query: 259 DVVQKIEMTVTGANDRPVKDVVISD 185
VV+K+E +G+ + V+I D
Sbjct: 146 TVVEKMEQVGSGSGG-TAERVLIED 169
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 141 bits (342), Expect = 3e-34
Identities = 79/147 (53%), Positives = 88/147 (59%), Gaps = 7/147 (4%)
Frame = -2
Query: 601 GLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXXXXXXG 443
GLFG TVPKT ENF + +G G YKG+ FHR+I FMIQ
Sbjct: 59 GLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPFHRIIPGFMIQGGDTVSGNGTGC 118
Query: 442 RSIYGERFEDXNFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEG 263
SIYG F D NFK+ H G LSMAN KDTNGSQFFITTVK LDG+HVVFGKVL G
Sbjct: 119 DSIYGGMFPDENFKINHSAPGLLSMANYAKDTNGSQFFITTVKLTRLDGKHVVFGKVLSG 178
Query: 262 MDVVQKIEMTVTGANDRPVKDVVISDT 182
MDVV KIE + P V+ISD+
Sbjct: 179 MDVVYKIE-AEGSQSGTPRSKVLISDS 204
>02_01_0160 + 1116160-1116678
Length = 172
Score = 136 bits (330), Expect = 1e-32
Identities = 77/145 (53%), Positives = 87/145 (60%), Gaps = 7/145 (4%)
Frame = -2
Query: 598 LFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXXXXXXGR 440
L+ K VP+T ENF L +G G YKGS FHRVI FM Q G
Sbjct: 24 LYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGE 83
Query: 439 SIYGERFEDXNFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGM 260
SIYGE+F D FK KH G LSMANAG +TNGSQFFI TV WLDG+HVVFG+V+EGM
Sbjct: 84 SIYGEKFADEVFKFKHDSPGILSMANAGPNTNGSQFFICTVPCSWLDGKHVVFGRVVEGM 143
Query: 259 DVVQKIEMTVTGANDRPVKDVVISD 185
DVV+ IE V K VVI+D
Sbjct: 144 DVVKAIE-KVGSRGGSTAKPVVIAD 167
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 136 bits (329), Expect = 1e-32
Identities = 65/113 (57%), Positives = 78/113 (69%)
Frame = -2
Query: 523 KGSKFHRVIKNFMIQXXXXXXXXXXXGRSIYGERFEDXNFKLKHYGAGWLSMANAGKDTN 344
KGS HR++K FM+Q G SIYG FED NF LKH G LSMANAG DTN
Sbjct: 100 KGSCIHRIVKGFMVQGGDITAGDGTGGESIYGLNFEDENFVLKHERKGMLSMANAGPDTN 159
Query: 343 GSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 185
GSQFFITT +TP LDG+HVVFG+V++GM VV+ +E G +DRP+ D+VI D
Sbjct: 160 GSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITDIVIVD 212
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 132 bits (319), Expect = 2e-31
Identities = 65/113 (57%), Positives = 77/113 (68%)
Frame = -2
Query: 523 KGSKFHRVIKNFMIQXXXXXXXXXXXGRSIYGERFEDXNFKLKHYGAGWLSMANAGKDTN 344
+GS FHRVIK FM+Q G SIYG +FED NF LKH G LSMAN+G +TN
Sbjct: 118 QGSCFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENFVLKHERKGMLSMANSGPNTN 177
Query: 343 GSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 185
GSQFFITT +TP LDG+HVVFG+V++GM VV+ +E G DRP DV I D
Sbjct: 178 GSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSVEHAPVGEADRPTSDVEIVD 230
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 124 bits (299), Expect = 5e-29
Identities = 70/137 (51%), Positives = 84/137 (61%), Gaps = 1/137 (0%)
Frame = -2
Query: 598 LFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRSIYGERF 419
L+ + PKT ENF + Y FHRVIK FMIQ +SI+G F
Sbjct: 511 LYPEECPKTVENFTTHCRNGY---YDNLIFHRVIKGFMIQTGDPLGDGTGG-QSIWGREF 566
Query: 418 EDXNFK-LKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 242
ED K L+H LSMANAG +TNGSQFFITTV TPWLD +H VFG+V++GMDVVQ+I
Sbjct: 567 EDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQQI 626
Query: 241 EMTVTGANDRPVKDVVI 191
E T ND+P +DV I
Sbjct: 627 EKVKTDKNDKPYQDVKI 643
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 120 bits (290), Expect = 7e-28
Identities = 60/96 (62%), Positives = 66/96 (68%)
Frame = -2
Query: 601 GLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRSIYGER 422
GLFG+ VPKT +NF L +G GYKG FHR+IK+FMIQ GRSIYGE
Sbjct: 85 GLFGEVVPKTVDNFRALCTGDKGYGYKGCSFHRIIKDFMIQGGDFQNNNGTGGRSIYGEC 144
Query: 421 FEDXNFKLKHYGAGWLSMANAGKDTNGSQFFITTVK 314
F+D NF LKH G G LSMANAG DTNGSQFFI TVK
Sbjct: 145 FDDENFTLKHTGPGVLSMANAGPDTNGSQFFICTVK 180
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 114 bits (274), Expect = 6e-26
Identities = 61/140 (43%), Positives = 86/140 (61%), Gaps = 1/140 (0%)
Frame = -2
Query: 598 LFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRSIYGERF 419
++ K PKT NF +L+++ Y FHR+IK+F++Q SIYG +F
Sbjct: 25 MYYKHAPKTCRNFLELSRRGY---YDNVIFHRIIKDFIVQGGDPTGTGRGG-ESIYGAKF 80
Query: 418 EDX-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 242
ED +LKH GAG LSMANAG +TNGSQFFIT LDG+H +FG+V +GM++V+++
Sbjct: 81 EDEIRPELKHTGAGILSMANAGPNTNGSQFFITLAPCQSLDGKHTIFGRVSKGMEIVKRL 140
Query: 241 EMTVTGANDRPVKDVVISDT 182
T +DRP+ +V I T
Sbjct: 141 GSVQTDKSDRPIHEVKILRT 160
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 114 bits (274), Expect = 6e-26
Identities = 71/147 (48%), Positives = 81/147 (55%), Gaps = 9/147 (6%)
Frame = -2
Query: 598 LFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVIKNFMIQXXXXXXXXXXXG 443
LF P+T ENF L G G YKGS FHRVIK FM Q G
Sbjct: 27 LFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGSLFHRVIKGFMAQGGDFSNGDGSGG 86
Query: 442 RSIYGERFEDXNFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEG 263
SIYG FED NF L+H G LSMANAG +TNGSQFFIT LD + VFGK++ G
Sbjct: 87 ESIYGGTFEDENFVLRHDERGLLSMANAGPNTNGSQFFITFKHNSRLDRKSTVFGKLILG 146
Query: 262 MDVVQKIE-MTVTGANDRPVKDVVISD 185
DV+++IE + V GA PV V I D
Sbjct: 147 NDVLKRIEYVDVHGAGSTPVVPVRIVD 173
>10_01_0309 + 3417602-3418147
Length = 181
Score = 112 bits (269), Expect = 2e-25
Identities = 68/148 (45%), Positives = 82/148 (55%), Gaps = 10/148 (6%)
Frame = -2
Query: 598 LFGKTVPKTTENFFQLA--QKPEGEG-----YKGSKFHRVIKNFMIQXXXXXXXXXXXGR 440
L VP T ENF +L ++ G YKGS FHRV+ FM Q G
Sbjct: 31 LLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAFHRVVPGFMCQGGDITAGNGTGGE 90
Query: 439 SIY---GERFEDXNFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVL 269
S F D F +KH G G +SMANAG +TNGSQFFIT K PWLDGRHV FG+V+
Sbjct: 91 SALDGAARHFPDEGFAVKHDGPGVVSMANAGPNTNGSQFFITVDKAPWLDGRHVAFGRVV 150
Query: 268 EGMDVVQKIEMTVTGANDRPVKDVVISD 185
GM V+ I+ T T + + VK VVI+D
Sbjct: 151 AGMGAVRAIDRTGTWSG-KTVKPVVITD 177
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 104 bits (249), Expect = 6e-23
Identities = 66/148 (44%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Frame = -2
Query: 601 GLFGKTVPKTTENFFQLAQKPEGEG-------YKGSKFHRVIKNFMIQXXXXXXXXXXXG 443
GL+G VPKT NF L EG G YKGS+FHR+I FMIQ
Sbjct: 57 GLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKGSRFHRIIPGFMIQGGDI-------- 108
Query: 442 RSIYGERFEDXNFKLKHYGAGW-LSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLE 266
+ G+ G G ++MAN+G D+NGSQF+ITT+KT WLDG HVVFG+V++
Sbjct: 109 --VRGD------------GKGSVIAMANSGPDSNGSQFYITTIKTSWLDGEHVVFGRVIQ 154
Query: 265 GMDVVQKIEMTVTGANDRPVKDVVISDT 182
GMD V IE N +P K VVI+D+
Sbjct: 155 GMDYVYAIEGGAGTYNGKPRKKVVITDS 182
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 101 bits (243), Expect = 3e-22
Identities = 57/135 (42%), Positives = 75/135 (55%), Gaps = 1/135 (0%)
Frame = -2
Query: 598 LFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRSIYGERF 419
+F P+T ENF L Y G+ FHR IK FMIQ SI+G++F
Sbjct: 16 VFCDQAPRTAENFLALCASGY---YDGTIFHRNIKGFMIQGGDPTGTGKGGT-SIWGKKF 71
Query: 418 EDX-NFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKI 242
D LKH G +SMAN+G +TNGSQFFIT K P L+G + VF KV+ G +V+ +
Sbjct: 72 ADEFRESLKHNARGVMSMANSGPNTNGSQFFITYAKQPHLNGHYTVFAKVIHGFEVLDLM 131
Query: 241 EMTVTGANDRPVKDV 197
E TG DRP+ ++
Sbjct: 132 EKAQTGPGDRPLAEI 146
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 95.5 bits (227), Expect = 3e-20
Identities = 59/148 (39%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Frame = -2
Query: 580 PKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRSIYGERFEDX-NF 404
P+T ENF E Y G FHR IKNFMIQ SI+G+ F+D N
Sbjct: 366 PRTCENFLTHC---ENGYYNGLIFHRSIKNFMIQGGDPTGTGSGG-ESIWGKPFKDELNS 421
Query: 403 KLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTG 224
KL H G G +SMAN+G TNGSQFFI P L+ +H VFG V+ G+ + +E
Sbjct: 422 KLIHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFGMVVGGLTTLSAMEKVPVD 481
Query: 223 ANDRPVKDVVISDTKTEVVAEPFSVTKE 140
+DRP++++ I K V P++ E
Sbjct: 482 DDDRPLEEIKI--LKVSVFVNPYTEPDE 507
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 80.2 bits (189), Expect = 1e-15
Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 8/150 (5%)
Frame = -2
Query: 580 PKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXG---RSIYGE--RFE 416
P TT+NF +L + + Y G FH+V K+F+ Q + +YG+ RF
Sbjct: 22 PLTTKNFLKLCKM---KYYNGCLFHKVEKDFLAQTGDPTGTGAGGDSVYKFLYGDQARFF 78
Query: 415 DXNFK--LKHYGAGWLSMANAGKDTNGSQFFITTVK-TPWLDGRHVVFGKVLEGMDVVQK 245
D + L+H G ++MA+AG++ N SQF+IT +LD +H VFG V EG D + K
Sbjct: 79 DDEIRPDLRHSKKGTIAMASAGENCNASQFYITLRDDVDYLDDKHTVFGMVAEGFDTLTK 138
Query: 244 IEMTVTGANDRPVKDVVISDTKTEVVAEPF 155
I T RP KD+ I T V+ +PF
Sbjct: 139 ISETYVDDKGRPFKDIRIK--HTYVLDDPF 166
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 76.2 bits (179), Expect = 2e-14
Identities = 57/152 (37%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Frame = -2
Query: 598 LFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRSIYGERF 419
L+ K PK NF QL EG Y G+ FHRVIK+F++Q SIYG F
Sbjct: 28 LWPKEAPKAVRNFVQLCL--EGY-YDGTLFHRVIKSFLVQGGDPTGSGTGG-ESIYGAPF 83
Query: 418 EDX-NFKLKHYGAGWLSMANAGKD-TNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQK 245
D + +L+ G ++ ANAG +NGSQFFI+ + WLD ++ +FGKV G +
Sbjct: 84 ADEFHTRLRFNHRGLVACANAGTPHSNGSQFFISLDRCDWLDKKNTIFGKV-TGDSIFNL 142
Query: 244 IEMT--VTGANDRPVKDVVISDTKTEVVAEPF 155
+ + T +DRPV I EV+ PF
Sbjct: 143 LALADIETDKDDRPVYPQKI--LSVEVLWNPF 172
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 72.5 bits (170), Expect = 2e-13
Identities = 40/85 (47%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Frame = -2
Query: 598 LFGKTVPKTTENFFQLA---QKPEG--EGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRSI 434
LF VPKT ENF Q + G +GYKG +FHRVIK+FMIQ SI
Sbjct: 57 LFADIVPKTAENFRQFCTGEHRKSGLPQGYKGCQFHRVIKDFMIQGGDYMKGDGTGCTSI 116
Query: 433 YGERFEDXNFKLKHYGAGWLSMANA 359
YG +F+D NF KH G G LSM +
Sbjct: 117 YGTKFDDENFIAKHTGPGLLSMVRS 141
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Frame = -2
Query: 337 QFFITTVKTPWLDGRHVVFGKVL-EGMDVVQKIEMTVTGANDRPVKDVVISD 185
QFFIT K WLD +HVVFG+VL +GM V+KIE TG N+RP VIS+
Sbjct: 200 QFFITCAKCEWLDNKHVVFGRVLGDGMLAVRKIENVATGPNNRPKLACVISE 251
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 64.9 bits (151), Expect = 5e-11
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = -2
Query: 403 KLKHYGAGWLSMANAGKDTNGSQFFITTVK-TPWLDGRHVVFGKVLEGMDVVQKIEMTVT 227
+L+H G ++MA+AG++ N SQF+IT +LD +H VFG V EG D + KI T
Sbjct: 115 ELRHSKMGTIAMASAGENCNASQFYITLRDGVDYLDDKHTVFGMVAEGFDTITKINETYV 174
Query: 226 GANDRPVKDVVISDTKTEVVAEPF 155
RP KD+ I T V+ +PF
Sbjct: 175 DDKGRPFKDIRI--RHTYVLDDPF 196
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 51.2 bits (117), Expect = 6e-07
Identities = 32/106 (30%), Positives = 48/106 (45%)
Frame = -2
Query: 526 YKGSKFHRVIKNFMIQXXXXXXXXXXXGRSIYGERFEDXNFKLKHYGAGWLSMANAGKDT 347
+KG F VIKNF+IQ + + + KH ++ +
Sbjct: 130 FKGMPFRHVIKNFVIQGGDFDFNGAAQEWILKAKASGENALSPKH--EAFMIGTTKNPNN 187
Query: 346 NGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVTGANDRP 209
G FITT P L+ + VVFG+V+ G D+VQ+IE T + +P
Sbjct: 188 KGFDLFITTAPIPDLNDKLVVFGQVINGQDIVQEIEEVDTDEHYQP 233
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 48.8 bits (111), Expect = 3e-06
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Frame = -2
Query: 601 GLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRSIYGER 422
G F PKT E+ ++L + Y + F RV K F+ Q E
Sbjct: 89 GFFPHVAPKTVEHIYKLVRLG---CYNTNHFFRVDKGFVAQVASVVGGRTAPMNDEQQEE 145
Query: 421 FEDX---NFKLKHYGAGWLSMA-NAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDV 254
E F + G LSM ++ ++ GS F I P LDG++ VFG++ +G D
Sbjct: 146 AEKSVVGEFSTVKHVRGILSMGRHSDPNSGGSSFSILLGDAPHLDGQYAVFGRLTKGDDT 205
Query: 253 VQKIEMTVT 227
++K+E T
Sbjct: 206 LRKLEQLPT 214
>02_01_0086 + 613113-613532
Length = 139
Score = 47.6 bits (108), Expect = 8e-06
Identities = 37/123 (30%), Positives = 49/123 (39%)
Frame = -2
Query: 598 LFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKNFMIQXXXXXXXXXXXGRSIYGERF 419
L+ VP T ENF L K YKG + ++ R
Sbjct: 3 LYADLVPLTAENFRALYTKKPLH-YKGLCLSQHYPRIHVEGRRLRQGPWHRRRVHLRRHL 61
Query: 418 EDXNFKLKHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIE 239
+ NF L H WL N + N SQFF + PW DG +VVFG ++ G ++ IE
Sbjct: 62 PNENFLLPH-DRPWLP--NGSAENNISQFF---TRVPWFDGNYVVFGCIISGFHNLKAIE 115
Query: 238 MTV 230
V
Sbjct: 116 AEV 118
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = -2
Query: 346 NGSQFFITTVKTPWLDGRHVVFGKVLEGMDVVQKIEMTVT 227
NG++F ITT P LD +V G+V++GMDV+ KI T
Sbjct: 206 NGTEFVITTGDAPELDASALVVGRVVDGMDVLGKIAAVPT 245
>08_02_0053 + 11721658-11721689,11721960-11722710
Length = 260
Score = 39.1 bits (87), Expect = 0.003
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 18/131 (13%)
Frame = -2
Query: 601 GLFGKTVPKTTENFFQLAQKPEGEGYKGSKFHRVIKN-FMIQXXXXXXXXXXXGRSIYG- 428
GL+G+ +P TT NF Y+G+ H++++ F + + G
Sbjct: 133 GLYGRLLPLTTANFKAACTSA---AYRGTLVHKLLQGQFFVAGRQGPRRDRGEVQPPTGL 189
Query: 427 ----ERFEDXNFKLKHYGAGWLSMANAGKDTNGS----------QFFITTVKTPW--LDG 296
E + F+LKH G LS+ D + +F +TT P LDG
Sbjct: 190 VRNAETIDPKAFELKHARPGTLSLCLGQNDDDDDIKLNPNYHNVEFLVTTGPGPCPELDG 249
Query: 295 RHVVFGKVLEG 263
+++VFG VLEG
Sbjct: 250 QNIVFGTVLEG 260
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
Frame = -2
Query: 598 LFGKTVPKTTENFFQLAQKPEGEG--------YKGSKFHRVIKNFMIQ 479
LF VPKTTENF L G G +KG+ HR++K FM Q
Sbjct: 28 LFADVVPKTTENFRALCTGERGLGVSTQKPLYFKGTNMHRILKGFMAQ 75
Score = 32.3 bits (70), Expect = 0.30
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = -2
Query: 295 RHVVFGKVLEGMDVVQKIEMTVTGANDRPVKDVVISD 185
+HVVFGKV+ GM +++K+E V +P +V I D
Sbjct: 94 KHVVFGKVVTGMPLLKKLE-AVGSDTGKPTCEVKIVD 129
>06_01_1095 +
8984363-8984789,8985175-8985416,8985500-8985622,
8985783-8985899,8986258-8986399,8986587-8986627,
8987194-8987453,8987505-8987607,8987698-8987776,
8987856-8988115
Length = 597
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 407 VXIFKTFTIYTAPSSSITLGKITTLDHEIFN---YSVELAPFVPLPLRFLS 550
V + TI A + S+ T LD ++FN +++ PFVPL L+ L+
Sbjct: 132 VVLLNLVTIVFASNISVVKEAETMLDPDLFNVLRFTISAIPFVPLLLKALN 182
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,192,381
Number of Sequences: 37544
Number of extensions: 259160
Number of successful extensions: 522
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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