Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_J15
         (674 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0064 + 6485145-6487884,6487900-6488247,6488343-6488722           31   1.1  
10_08_0397 + 17571492-17571664,17571875-17572034,17572140-175722...    28   7.8  
02_04_0280 - 21548920-21549032,21549379-21549397,21549555-21550619     28   7.8  

>02_02_0064 + 6485145-6487884,6487900-6488247,6488343-6488722
          Length = 1155

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +3

Query: 489 SWADWLTXSTTRRAMTCDTARGTLRGRAVNNDLCG 593
           SW D  T     R ++C  A G  RGR V  DL G
Sbjct: 71  SWGDGSTPLCRWRGVSCGVAAGRRRGRVVALDLAG 105


>10_08_0397 +
           17571492-17571664,17571875-17572034,17572140-17572222,
           17572333-17572468,17572515-17572610,17573105-17573218,
           17573322-17573405,17573493-17573648,17573744-17573818,
           17574318-17574424,17574508-17574688,17574832-17575020,
           17575397-17575477,17575621-17575755,17576007-17576329,
           17576503-17576608,17576734-17576883,17577034-17577180
          Length = 831

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 197 DAIACCSFSQLSVFNKLNAQFINII 123
           DAI CCSF +  VF   N   +N++
Sbjct: 725 DAILCCSFKEKPVFTFANEMGLNML 749


>02_04_0280 - 21548920-21549032,21549379-21549397,21549555-21550619
          Length = 398

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 22/74 (29%), Positives = 32/74 (43%)
 Frame = +3

Query: 45  DEILQYCKSSHENKRIEKCNRNAQHHYNINKLCIKFIEDTQLTKTTTCYSVII*MTSVDI 224
           D +L  C S H+  R   C  N QH       C++  ++    K    +SV+I  +S  +
Sbjct: 63  DAVLLLCTSHHKGCRPYMCGTNHQH-----SNCLEHFKEA-YAKEKLAHSVLI-ESSPGL 115

Query: 225 SNVYNSNFEQGQQC 266
           S   NS     QQC
Sbjct: 116 SLSLNSQPASKQQC 129


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,004,094
Number of Sequences: 37544
Number of extensions: 198970
Number of successful extensions: 412
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)