Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_J15
(674 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.2
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.5
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 24 1.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.0
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.0
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.0
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 2.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.5
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.7
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 4.7
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 6.1
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 6.1
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 8.1
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 21 8.1
AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein. 21 8.1
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 21 8.1
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 591 HRGHCSPLSPGVFPELCHMSL 529
H G C + PG+F C M +
Sbjct: 95 HDGSCLYVPPGIFKSTCKMDI 115
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.8 bits (49), Expect = 1.5
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 591 HRGHCSPLSPGVFPELCHMSL 529
H G C + PG+F C M +
Sbjct: 95 HDGSCLYVPPGIFKSTCKMDV 115
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 51 ILQYCKSSHENKRIEKCNRNAQHHYNINKLCIKF 152
I Y SH + EK +N + + I K +KF
Sbjct: 150 ITMYDLKSHNDIYCEKYEKNGETYLRIKKHAVKF 183
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.0
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = -3
Query: 591 HRGHCSPLSPGVFPELCHMSL 529
H G C + PG+F C + +
Sbjct: 95 HNGSCLYVPPGIFKSTCKIDI 115
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.0
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = -3
Query: 591 HRGHCSPLSPGVFPELCHMSL 529
H G C + PG+F C + +
Sbjct: 163 HNGSCLYVPPGIFKSTCKIDI 183
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.0
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = -3
Query: 591 HRGHCSPLSPGVFPELCHMSL 529
H G C + PG+F C + +
Sbjct: 163 HNGSCLYVPPGIFKSTCKIDI 183
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.0 bits (47), Expect = 2.7
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -3
Query: 618 HPHWYAGSIHRGHCSPLSPGVFP 550
H H +A + H H +PL+ +P
Sbjct: 432 HHHSHAATPHHQHSTPLAHSSYP 454
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = -3
Query: 591 HRGHCSPLSPGVFPELCHMSL 529
H G C + PG+F C + +
Sbjct: 95 HDGSCLYVPPGIFKSTCKIDI 115
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = -3
Query: 591 HRGHCSPLSPGVFPELCHMSL 529
H G C + PG+F C + +
Sbjct: 95 HDGSCLYVPPGIFKSTCKIDI 115
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.6 bits (46), Expect = 3.5
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 146 NAQFINIIVMLSIPIAFFYPFILVTAFTV 60
N N V S IAF YP +L+ TV
Sbjct: 804 NLLVCNSYVDASYMIAFAYPIMLIVVCTV 832
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.2 bits (45), Expect = 4.7
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = -3
Query: 591 HRGHCSPLSPGVFPELCHMSL 529
H G C + PG+F C + +
Sbjct: 95 HDGSCLYVPPGIFGSTCKIDI 115
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.2 bits (45), Expect = 4.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 69 SSHENKRIEKCNRNAQHHYNINKLCIKFIEDTQLTKT 179
S E+ R++ +H+N+NK C I TQ+ +T
Sbjct: 1663 SDSESGRLDTEMSTWGYHHNVNKHCT--IHRTQVKET 1697
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 573 PLSPGVFPELCHMSLL 526
P SPG F CH +LL
Sbjct: 68 PNSPGSFTAGCHSNLL 83
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 573 PLSPGVFPELCHMSLL 526
P SPG F CH +LL
Sbjct: 68 PNSPGSFTAGCHSNLL 83
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3
Query: 117 HHYNINKLCIKFIEDTQL 170
H YN+ I FIED L
Sbjct: 212 HDYNLENKLIYFIEDIGL 229
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 597 SIHRGHCSPLSPGVF 553
S+H + SPLS G+F
Sbjct: 214 SVHYHYLSPLSAGLF 228
>AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein.
Length = 169
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 597 SIHRGHCSPLSPGVF 553
S+H + SPLS G+F
Sbjct: 85 SVHYHYLSPLSAGLF 99
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 597 SIHRGHCSPLSPGVF 553
S+H + SPLS G+F
Sbjct: 214 SVHYHYLSPLSAGLF 228
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,919
Number of Sequences: 438
Number of extensions: 2581
Number of successful extensions: 20
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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