Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_J14
(684 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 36 0.005
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 35 0.010
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 32 0.067
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 30 0.27
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 30 0.36
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 30 0.36
SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 30 0.36
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 29 0.83
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro... 29 0.83
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 28 1.1
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 28 1.1
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 28 1.4
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 27 1.9
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 3.3
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 27 3.3
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 27 3.3
SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation... 26 4.4
SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb... 26 4.4
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 26 5.8
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 26 5.8
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 26 5.8
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 26 5.8
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 5.8
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 25 7.7
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 25 7.7
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 35.9 bits (79), Expect = 0.005
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Frame = -1
Query: 498 IEHHTKEFHKTLEQQFNSLTKSKDAQDF---SKAWKDGSESVLQQLNAFAKSLQGALGDA 328
I+ K LEQ+ +L ++++A++ ++ + D S S +L A AK A DA
Sbjct: 98 IQPDEKTLQDLLEQRQVALREAREAEEELQRARQYNDRSTSEALELEARAKK---AAQDA 154
Query: 327 NGKAKEALEQSRQNIERTAEELRK-AHPDVEKNATALRE 214
A E +++ +IER+A K A + E+ ATALRE
Sbjct: 155 E-LASERAREAQSSIERSASLREKQAREEAERAATALRE 192
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 35.1 bits (77), Expect = 0.010
Identities = 28/107 (26%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Frame = -1
Query: 468 TLEQQFNSLTKSKDAQD---FSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQ 298
T+E ++SL KSK + F + ++ + +L N + + L + +A KA+++LEQ
Sbjct: 8 TIELDYDSL-KSKISNFNSIFDRFLQEERKKLLNNKNEYLRQLS-EINEAQKKAEKSLEQ 65
Query: 297 SRQNIERTAEELRKAHPD---VEKNATALREKLQAAVQNTVQESQKL 166
+ + E L K H + E+ + +EKL A ++ + S++L
Sbjct: 66 TEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAMLKRKQKLSEEL 112
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 32.3 bits (70), Expect = 0.067
Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Frame = -1
Query: 321 KAKEALE---QSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVS 151
K KE +E Q ++ +ER E LRK + EK A + ++S +K+
Sbjct: 128 KEKEEMEGSLQGKEKLEREVENLRKELDKYKDLVETEAEKRAAITKEECEKSWLEQQKLY 187
Query: 150 SNVQETNEKLAPKIQGRLRRLREEHPGGDQEDPGGRQRQAVSVDI 16
++++ N K+ ++R L+ D + Q ++ +D+
Sbjct: 188 KDMEQENASTIQKLTSKIRELQASQLDHDLQ---ASQNESAGLDV 229
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 30.3 bits (65), Expect = 0.27
Identities = 17/81 (20%), Positives = 38/81 (46%)
Frame = -1
Query: 369 NAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQN 190
N + ++ AL + KA + LE+ ++ E + EE+ H + T+ + + +
Sbjct: 337 NLVSLAIYEALYEKFLKACKDLEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEK 396
Query: 189 TVQESQKLAKKVSSNVQETNE 127
+QE ++ K + Q+ +E
Sbjct: 397 IIQEKSRVDKMIDEYRQKLSE 417
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 29.9 bits (64), Expect = 0.36
Identities = 26/109 (23%), Positives = 47/109 (43%)
Frame = -1
Query: 549 LAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQL 370
L + V R F + +EH+ K+LE+Q + L +SKDA A S+
Sbjct: 193 LKKSKSVPRLRGQFMEPVEHN-HPLSKSLEEQSSFLEQSKDASSNLTACNRSGSSLSSNF 251
Query: 369 NAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATA 223
+ S + +L N K++ +L+ ++ R P+V + +A
Sbjct: 252 YSSRLSKKTSLASLN-KSRASLQHKIMSLSRNIIRRVFHKPEVHLDPSA 299
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 29.9 bits (64), Expect = 0.36
Identities = 21/85 (24%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = -1
Query: 321 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 142
K+++ LE S Q +E E + P+V++ +EK ++ V+ +E +K+++ + S+
Sbjct: 132 KSEKPLETS-QKVEIETVETKPGEPEVKQETNLQKEKKESKVKLESKE-EKISRNLRSSS 189
Query: 141 QE----TNEKLAPKIQGRLRRLREE 79
+ T + +PKIQ + +E+
Sbjct: 190 RSISPVTEQPQSPKIQPVIPEKKEK 214
>SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 168
Score = 29.9 bits (64), Expect = 0.36
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -1
Query: 402 KDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEE 265
KDG+++ +LN FAK L + + +A + + IE+++ E
Sbjct: 111 KDGTDAFANELNLFAKKLGFSKNSFDARALDTESEDETEIEKSSSE 156
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 28.7 bits (61), Expect = 0.83
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -1
Query: 423 QDFSKAWKDGSESVLQQLNAFAKSLQGALGD-ANGKAKEALEQSR-QNIERTAE 268
+D + A+ + SVLQ+L+ + +QG LG N AL Q + QN++ E
Sbjct: 79 EDMANAFAEKRRSVLQELSELEEEVQGILGVLENPDLIAALRQDKGQNLQHLQE 132
>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 240
Score = 28.7 bits (61), Expect = 0.83
Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = -1
Query: 312 EALEQSRQNIE-RTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQE 136
+ E++ + I+ R+ EEL++A + + A +EK + + + K+ +K + +
Sbjct: 28 DQFEETEEEIKKRSPEELKQAIEALREKAKEKKEKERILALEEKKTNYKILQKSNDETAQ 87
Query: 135 TNEKLAPKIQGRLRRLREEHPGGDQEDPGGRQRQAVSVDIE 13
K+ + Q RLR L++ Q+ QR+ + +IE
Sbjct: 88 AMRKM--QDQARLRDLQKIR---QQKAEDAEQRKKILAEIE 123
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 28.3 bits (60), Expect = 1.1
Identities = 33/147 (22%), Positives = 56/147 (38%), Gaps = 3/147 (2%)
Frame = -1
Query: 528 RRDAPDFFKDIEHHTKEFHKTLEQQFNSLT---KSKDAQDFSKAWKDGSESVLQQLNAFA 358
++ DFFK + ++ H TL ++ NSL+ +K + G + +LN
Sbjct: 56 KKSEQDFFKMLSSRDRDAHSTLRKRSNSLSSFLSTKSTSASENKFHGGLNWLSLKLNLLL 115
Query: 357 KSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQE 178
+ LQG + A S + E V +N + R+ L V ++Q
Sbjct: 116 R-LQGRMNSAR------TNTSMNPYSCDSNENLSTLSSVNQNFNS-RQLLATIVPESIQN 167
Query: 177 SQKLAKKVSSNVQETNEKLAPKIQGRL 97
L + V++ L P I G L
Sbjct: 168 GCSLLRITKKKVRQRKVSLDP-ISGYL 193
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 28.3 bits (60), Expect = 1.1
Identities = 24/88 (27%), Positives = 45/88 (51%)
Frame = -1
Query: 498 IEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGK 319
IE K F K ++ NS K+ +A F +G++ ++ + A ++L L +
Sbjct: 73 IESSMKSF-KPVKIDLNSQLKAINA--FEAKASEGAKKNVELVKAELQNLSATLKN---- 125
Query: 318 AKEALEQSRQNIERTAEELRKAHPDVEK 235
+EQ+R E T E++++A P++EK
Sbjct: 126 ----IEQARPTEEITIEDMKQAVPEIEK 149
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 27.9 bits (59), Expect = 1.4
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = -1
Query: 468 TLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGA------LGDANGKAKEA 307
T++ + SL K D + ++ ES L L L A L D+ KAK
Sbjct: 354 TIQIELESLRKETDTTSVER--REKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTE 411
Query: 306 LEQSRQNIERTAEE 265
LEQ+R +ERT E
Sbjct: 412 LEQARIELERTQRE 425
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 27.5 bits (58), Expect = 1.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 291 ASTVPKPPWPCRSRLRALPG 350
AST+ K PWP + L +PG
Sbjct: 38 ASTLEKEPWPASTALLVMPG 57
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = -1
Query: 522 DAPDFFKDIEHHTKEFHKTLEQ--QFNSLTKSKDAQDFSKAW 403
D +F D++ H K FH E+ + + +K D K W
Sbjct: 665 DMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKEW 706
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 3.3
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = -1
Query: 354 SLQGALGDANGKAKEALEQSRQNIE-----RTAEELRKAHPDVEKNATALREKLQAA 199
S++ L + N + KE +E + RT +E EKN LRE+L+ A
Sbjct: 520 SMKDDLTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTA 576
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 26.6 bits (56), Expect = 3.3
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = -1
Query: 393 SESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALRE 214
S + + A K L GA KAKE ++ R +RTA E+RK +E+ R
Sbjct: 143 SRRISGMILAHFKRLSGA---DEKKAKEEDKRIRLLAKRTAWEIRKKWKVIEREVRRRRA 199
Query: 213 KLQAAVQNTVQESQ 172
+ A Q + Q
Sbjct: 200 ERAAEAQRVAGKEQ 213
>SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation
factor eIF2 beta subunit|Schizosaccharomyces pombe|chr
1|||Manual
Length = 321
Score = 26.2 bits (55), Expect = 4.4
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 486 TKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQ-GALGDA 328
+K+ + E+Q +T DFS K + L+AF K L+ + GDA
Sbjct: 89 SKKSSASAEEQTEDITTESGELDFSSMKKKKKKKKSADLSAFEKELEASSTGDA 142
>SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 26.2 bits (55), Expect = 4.4
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = -1
Query: 300 QSRQNIERTAEELRKAHPDVE-KNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEK 124
++RQ E A+ +RK+ PDV KN L + ++++V + V+S++ +
Sbjct: 284 ENRQFSEYVADRIRKSFPDVSFKNLHVL-----SCMEDSVMSPFRELGSVTSSMSSLSPI 338
Query: 123 LAPKIQGRLRRLREEHPGGDQE 58
L L++L+E + G++E
Sbjct: 339 LMDSFGDDLQKLKETY--GEEE 358
>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 25.8 bits (54), Expect = 5.8
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -1
Query: 558 CIALAQGAMVRRDAPDFFKDIEHHTKEFH-KTLEQQFNSLTKSKDAQDFSKAWKDGSESV 382
C + +G +RR P +++ I ++ KTL + FN+ + +++ + KA ++G V
Sbjct: 13 CEYVFKGDGLRRVPPYYYEYITFAKLRWYGKTLLEVFNTEFRDRESGYYEKAIRNGQVKV 72
Query: 381 LQQL 370
Q+
Sbjct: 73 NNQI 76
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 25.8 bits (54), Expect = 5.8
Identities = 20/96 (20%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Frame = -1
Query: 333 DANGKAKEALE-QSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQ--NTVQESQKLA 163
D K+ L+ +S +E TA RK +K+ + + + +Q NTVQ+ +
Sbjct: 272 DFEENRKQYLQNKSGSPVEETAILNRKPTLRKKKSIPKKQNESSSTIQKENTVQQEASSS 331
Query: 162 KKVSSNVQETNEKLAPKIQGRLRRLREEHPGGDQED 55
++ + ++ +I+ + ++EE G++E+
Sbjct: 332 EEEAVKSLPETQRTTSRIETQEEEIKEEEMEGEEEE 367
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.8 bits (54), Expect = 5.8
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 11/150 (7%)
Frame = -1
Query: 492 HHTKEFHKTLEQQFNSLTKSKD--AQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGK 319
+H K+ H +L N KS ++ K++K ++ + L +QG+ + +
Sbjct: 261 YHEKKTH-SLVCNLNGERKSFGDFVENEVKSYKHEYANICESLRRALVLIQGSCTEKILR 319
Query: 318 AKEALEQSRQNIERTAEELRKAHPDVEKNATALREK-----LQAAVQNTVQES----QKL 166
KE + + +++ E R +H + E + T + K L+ AV+ E ++
Sbjct: 320 FKEKILDLLE-MKQQEENDRISHIEYENDLTVKKLKRRISELEMAVKEYESEKSYSEKEY 378
Query: 165 AKKVSSNVQETNEKLAPKIQGRLRRLREEH 76
+K+SS E +KLA R + L+EEH
Sbjct: 379 EEKISSLRIELEDKLAEIDMLRNKLLKEEH 408
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 25.8 bits (54), Expect = 5.8
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Frame = -1
Query: 312 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV------- 154
+ + QS ++ RTA L VEK A+ + ++ +Q+ V + A V
Sbjct: 643 DQVRQSPTSMIRTASGLTNRIVSVEKPASVMNPEIDKQIQDQVALATNSAMSVLTLLIDA 702
Query: 153 ---SSNVQETNEKLAPKIQGRLRRL 88
++ NE +AP + +LR L
Sbjct: 703 VPKNNQPDLVNENIAPNLISKLREL 727
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.8 bits (54), Expect = 5.8
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = -1
Query: 474 HKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANG---KAKEAL 304
H+T+ +Q + +A + ES L N ++ L ++N K +E +
Sbjct: 625 HQTITKQLKDTSSKLQQLQLERANFEQKESTLSDENNDLRTKLLKLEESNKSLIKKQEDV 684
Query: 303 EQSRQNIERTAEELRKA 253
+ +NI+ E+LRK+
Sbjct: 685 DSLEKNIQTLKEDLRKS 701
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 25.4 bits (53), Expect = 7.7
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 264 LRKAHPDVEKNATALREKLQAAVQNTVQE 178
L AH D+E T++RE+L++ + +E
Sbjct: 267 LDSAHSDLELELTSIRERLESLILEKQEE 295
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 25.4 bits (53), Expect = 7.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 327 NGKAKEALEQSRQNIERTAEELRKAHPDVEKN 232
N K KE E++ + EELR+A PD E++
Sbjct: 22 NEKLKEDFEENVSIDVKIHEELRRALPDYEES 53
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,110,617
Number of Sequences: 5004
Number of extensions: 35108
Number of successful extensions: 206
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 315915086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -