Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_J13
(303 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66358-1|AAC47472.1| 149|Drosophila melanogaster RpL27a protein. 91 3e-19
U66357-1|AAC47475.1| 149|Drosophila melanogaster ribosomal prot... 91 3e-19
AY071144-1|AAL48766.1| 149|Drosophila melanogaster RE17991p pro... 91 3e-19
AE014134-746|AAF51006.3| 149|Drosophila melanogaster CG15442-PA... 91 3e-19
X74484-1|CAA52601.1| 149|Drosophila melanogaster ribosomal prot... 89 1e-18
EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein. 28 2.6
EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein. 28 2.6
X95178-1|CAA64485.1| 693|Drosophila melanogaster caupolican hom... 27 4.6
BT021246-1|AAX33394.1| 693|Drosophila melanogaster RE64213p pro... 27 4.6
BT015986-1|AAV36871.1| 693|Drosophila melanogaster RE59515p pro... 27 4.6
AY122206-1|AAM52718.1| 325|Drosophila melanogaster LP03275p pro... 27 4.6
AE014296-2165|AAF49895.1| 693|Drosophila melanogaster CG10605-P... 27 4.6
BT012302-1|AAS77427.1| 778|Drosophila melanogaster RE56731p pro... 26 8.0
BT001321-1|AAN71076.1| 1023|Drosophila melanogaster AT15860p pro... 26 8.0
AY089344-1|AAL90082.1| 922|Drosophila melanogaster AT16542p pro... 26 8.0
AF220425-1|AAK68930.1| 778|Drosophila melanogaster serrano prot... 26 8.0
AE014296-2480|AAF49661.2| 922|Drosophila melanogaster CG13457-P... 26 8.0
AE014296-2479|AAN11789.1| 1023|Drosophila melanogaster CG13457-P... 26 8.0
AE013599-2797|AAM68430.1| 778|Drosophila melanogaster CG12758-P... 26 8.0
AE013599-2796|AAM68429.1| 778|Drosophila melanogaster CG12758-P... 26 8.0
AE013599-2795|AAM68428.1| 778|Drosophila melanogaster CG12758-P... 26 8.0
AE013599-2794|AAF57617.2| 778|Drosophila melanogaster CG12758-P... 26 8.0
>U66358-1|AAC47472.1| 149|Drosophila melanogaster RpL27a protein.
Length = 149
Score = 90.6 bits (215), Expect = 3e-19
Identities = 36/49 (73%), Positives = 40/49 (81%)
Frame = -3
Query: 151 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTXV 5
NAGG HHHRIN DKYHPGYFGK+GMRNFH R+ F P +NLDKLW+ V
Sbjct: 35 NAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFRPEINLDKLWSLV 83
>U66357-1|AAC47475.1| 149|Drosophila melanogaster ribosomal protein
RpL27a protein.
Length = 149
Score = 90.6 bits (215), Expect = 3e-19
Identities = 36/49 (73%), Positives = 40/49 (81%)
Frame = -3
Query: 151 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTXV 5
NAGG HHHRIN DKYHPGYFGK+GMRNFH R+ F P +NLDKLW+ V
Sbjct: 35 NAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFRPEINLDKLWSLV 83
>AY071144-1|AAL48766.1| 149|Drosophila melanogaster RE17991p
protein.
Length = 149
Score = 90.6 bits (215), Expect = 3e-19
Identities = 36/49 (73%), Positives = 40/49 (81%)
Frame = -3
Query: 151 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTXV 5
NAGG HHHRIN DKYHPGYFGK+GMRNFH R+ F P +NLDKLW+ V
Sbjct: 35 NAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFRPEINLDKLWSLV 83
>AE014134-746|AAF51006.3| 149|Drosophila melanogaster CG15442-PA
protein.
Length = 149
Score = 90.6 bits (215), Expect = 3e-19
Identities = 36/49 (73%), Positives = 40/49 (81%)
Frame = -3
Query: 151 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTXV 5
NAGG HHHRIN DKYHPGYFGK+GMRNFH R+ F P +NLDKLW+ V
Sbjct: 35 NAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFRPEINLDKLWSLV 83
>X74484-1|CAA52601.1| 149|Drosophila melanogaster ribosomal protein
L27a protein.
Length = 149
Score = 88.6 bits (210), Expect = 1e-18
Identities = 35/49 (71%), Positives = 39/49 (79%)
Frame = -3
Query: 151 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTXV 5
N GG HHHRIN DKYHPGYFGK+GMRNFH R+ F P +NLDKLW+ V
Sbjct: 35 NLGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFRPEINLDKLWSLV 83
>EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 145 GGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKN 47
GG+ +M++YH G G+R H+ N N
Sbjct: 410 GGDSQSESDMNEYHDNGEGHDGLRPSHYNSNSN 442
>EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 145 GGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKN 47
GG+ +M++YH G G+R H+ N N
Sbjct: 410 GGDSQSESDMNEYHDNGEGHDGLRPSHYNSNSN 442
>X95178-1|CAA64485.1| 693|Drosophila melanogaster caupolican
homeoprotein protein.
Length = 693
Score = 27.1 bits (57), Expect = 4.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 133 HHRINMDKYHPGYFGKLGMRNFHFRKN 53
HH+++ YHPG +G+ F +KN
Sbjct: 419 HHQMDQPYYHPGGYGQEESGEFAAQKN 445
>BT021246-1|AAX33394.1| 693|Drosophila melanogaster RE64213p
protein.
Length = 693
Score = 27.1 bits (57), Expect = 4.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 133 HHRINMDKYHPGYFGKLGMRNFHFRKN 53
HH+++ YHPG +G+ F +KN
Sbjct: 419 HHQMDQPYYHPGGYGQEESGEFAAQKN 445
>BT015986-1|AAV36871.1| 693|Drosophila melanogaster RE59515p
protein.
Length = 693
Score = 27.1 bits (57), Expect = 4.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 133 HHRINMDKYHPGYFGKLGMRNFHFRKN 53
HH+++ YHPG +G+ F +KN
Sbjct: 419 HHQMDQPYYHPGGYGQEESGEFAAQKN 445
>AY122206-1|AAM52718.1| 325|Drosophila melanogaster LP03275p
protein.
Length = 325
Score = 27.1 bits (57), Expect = 4.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 133 HHRINMDKYHPGYFGKLGMRNFHFRKN 53
HH+++ YHPG +G+ F +KN
Sbjct: 51 HHQMDQPYYHPGGYGQEESGEFAAQKN 77
>AE014296-2165|AAF49895.1| 693|Drosophila melanogaster CG10605-PA
protein.
Length = 693
Score = 27.1 bits (57), Expect = 4.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 133 HHRINMDKYHPGYFGKLGMRNFHFRKN 53
HH+++ YHPG +G+ F +KN
Sbjct: 419 HHQMDQPYYHPGGYGQEESGEFAAQKN 445
>BT012302-1|AAS77427.1| 778|Drosophila melanogaster RE56731p
protein.
Length = 778
Score = 26.2 bits (55), Expect = 8.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 64 SGNFSYQVCQSIQDGTCPC*FCDGAHHQHYHDLLDAY 174
SGN +Y +S + + G+HH H+H +++ Y
Sbjct: 422 SGNNNYSSLESNKHSSSGGGHHPGSHHHHHHHVVNHY 458
>BT001321-1|AAN71076.1| 1023|Drosophila melanogaster AT15860p
protein.
Length = 1023
Score = 26.2 bits (55), Expect = 8.0
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 106 GTCPC*FCDGAHHQHYHDLLDAYG 177
GT PC C G+ YH AYG
Sbjct: 192 GTTPCCNCKGSWDMGYHQQCCAYG 215
>AY089344-1|AAL90082.1| 922|Drosophila melanogaster AT16542p
protein.
Length = 922
Score = 26.2 bits (55), Expect = 8.0
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 106 GTCPC*FCDGAHHQHYHDLLDAYG 177
GT PC C G+ YH AYG
Sbjct: 91 GTTPCCNCKGSWDMGYHQQCCAYG 114
>AF220425-1|AAK68930.1| 778|Drosophila melanogaster serrano protein
protein.
Length = 778
Score = 26.2 bits (55), Expect = 8.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 64 SGNFSYQVCQSIQDGTCPC*FCDGAHHQHYHDLLDAY 174
SGN +Y +S + + G+HH H+H +++ Y
Sbjct: 422 SGNNNYSSLESNKHSSSGGGHHPGSHHHHHHHVVNHY 458
>AE014296-2480|AAF49661.2| 922|Drosophila melanogaster CG13457-PA,
isoform A protein.
Length = 922
Score = 26.2 bits (55), Expect = 8.0
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 106 GTCPC*FCDGAHHQHYHDLLDAYG 177
GT PC C G+ YH AYG
Sbjct: 91 GTTPCCNCKGSWDMGYHQQCCAYG 114
>AE014296-2479|AAN11789.1| 1023|Drosophila melanogaster CG13457-PB,
isoform B protein.
Length = 1023
Score = 26.2 bits (55), Expect = 8.0
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 106 GTCPC*FCDGAHHQHYHDLLDAYG 177
GT PC C G+ YH AYG
Sbjct: 192 GTTPCCNCKGSWDMGYHQQCCAYG 215
>AE013599-2797|AAM68430.1| 778|Drosophila melanogaster CG12758-PD,
isoform D protein.
Length = 778
Score = 26.2 bits (55), Expect = 8.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 64 SGNFSYQVCQSIQDGTCPC*FCDGAHHQHYHDLLDAY 174
SGN +Y +S + + G+HH H+H +++ Y
Sbjct: 422 SGNNNYSSLESNKHSSSGGGHHPGSHHHHHHHVVNHY 458
>AE013599-2796|AAM68429.1| 778|Drosophila melanogaster CG12758-PC,
isoform C protein.
Length = 778
Score = 26.2 bits (55), Expect = 8.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 64 SGNFSYQVCQSIQDGTCPC*FCDGAHHQHYHDLLDAY 174
SGN +Y +S + + G+HH H+H +++ Y
Sbjct: 422 SGNNNYSSLESNKHSSSGGGHHPGSHHHHHHHVVNHY 458
>AE013599-2795|AAM68428.1| 778|Drosophila melanogaster CG12758-PB,
isoform B protein.
Length = 778
Score = 26.2 bits (55), Expect = 8.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 64 SGNFSYQVCQSIQDGTCPC*FCDGAHHQHYHDLLDAY 174
SGN +Y +S + + G+HH H+H +++ Y
Sbjct: 422 SGNNNYSSLESNKHSSSGGGHHPGSHHHHHHHVVNHY 458
>AE013599-2794|AAF57617.2| 778|Drosophila melanogaster CG12758-PA,
isoform A protein.
Length = 778
Score = 26.2 bits (55), Expect = 8.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 64 SGNFSYQVCQSIQDGTCPC*FCDGAHHQHYHDLLDAY 174
SGN +Y +S + + G+HH H+H +++ Y
Sbjct: 422 SGNNNYSSLESNKHSSSGGGHHPGSHHHHHHHVVNHY 458
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,052,162
Number of Sequences: 53049
Number of extensions: 184085
Number of successful extensions: 841
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 570126357
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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