BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_J10
(735 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50472-1|AAA93475.1| 141|Anopheles gambiae protein ( Anopheles ... 101 3e-23
AY928182-1|AAX22219.1| 335|Anopheles gambiae phenoloxidase inhi... 26 1.1
AY341159-1|AAR13723.1| 159|Anopheles gambiae CED6 protein. 24 5.6
AY341158-1|AAR13722.1| 159|Anopheles gambiae CED6 protein. 24 5.6
AY341157-1|AAR13721.1| 159|Anopheles gambiae CED6 protein. 24 5.6
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 23 7.4
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 23 9.8
>U50472-1|AAA93475.1| 141|Anopheles gambiae protein ( Anopheles
gambiae putativefatty acid binding protein mRNA, partial
cds. ).
Length = 141
Score = 101 bits (241), Expect = 3e-23
Identities = 47/92 (51%), Positives = 60/92 (65%)
Frame = -2
Query: 716 GKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKF 537
GKKYKM SE FD++M +GVG++ RK N+++PTVEL K+GDEY T S +T
Sbjct: 35 GKKYKMEKSEGFDDYMLALGVGMVLRKLGNSISPTVELVKNGDEYTFNTLSPSRTRRSSS 94
Query: 536 KPGEEFEEDRADGAKVKSVCTFEGNTLKQVQK 441
EF+E+ DG VKSVCTF+GN L QK
Sbjct: 95 SWAMEFDEETVDGRMVKSVCTFDGNKLIHEQK 126
>AY928182-1|AAX22219.1| 335|Anopheles gambiae phenoloxidase
inhibitor protein protein.
Length = 335
Score = 26.2 bits (55), Expect = 1.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 154 GDETKISLATTVTTAGRLCAK 92
GDET L TT T+ ++CAK
Sbjct: 149 GDETSSILTTTHTSVPKMCAK 169
>AY341159-1|AAR13723.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 23.8 bits (49), Expect = 5.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 638 KAANAVTPTVELRKDGDEYNLVTSST 561
K VTPT + GD+ N +ST
Sbjct: 89 KTGTGVTPTSSIASSGDDTNSSNNST 114
>AY341158-1|AAR13722.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 23.8 bits (49), Expect = 5.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 638 KAANAVTPTVELRKDGDEYNLVTSST 561
K VTPT + GD+ N +ST
Sbjct: 89 KTGTGVTPTSSIASSGDDTNSSNNST 114
>AY341157-1|AAR13721.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 23.8 bits (49), Expect = 5.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 638 KAANAVTPTVELRKDGDEYNLVTSST 561
K VTPT + GD+ N +ST
Sbjct: 89 KTGTGVTPTSSIASSGDDTNSSNNST 114
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 23.4 bits (48), Expect = 7.4
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 67 NVFLNTINASRT 102
NVFL+T+N SRT
Sbjct: 3240 NVFLSTVNPSRT 3251
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.0 bits (47), Expect = 9.8
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 67 NVFLNTINASRT 102
NVFL+T+N SRT
Sbjct: 3237 NVFLSTVNHSRT 3248
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,966
Number of Sequences: 2352
Number of extensions: 13739
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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