Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_J01
         (747 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF109907-3|AAC97963.1| 1235|Homo sapiens hypothetical protein pr...    33   0.82 
AY358330-1|AAQ88696.1|  477|Homo sapiens papilin protein.              31   5.8  
AK131073-1|BAC85123.1|  659|Homo sapiens FLJ00259 protein protein.     31   5.8  
AK125658-1|BAC86235.1|  309|Homo sapiens protein ( Homo sapiens ...    31   5.8  

>AF109907-3|AAC97963.1| 1235|Homo sapiens hypothetical protein
            protein.
          Length = 1235

 Score = 33.5 bits (73), Expect = 0.82
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +3

Query: 387  SLLLHSRNRQGGGTYQCGLTRGPTTSKNIQDTFISTC 497
            SL++H    +  GTY CG TR    S+ IQ   I  C
Sbjct: 900  SLIIHPLQAEDAGTYSCGSTRPGRDSQKIQLRIIGLC 936


>AY358330-1|AAQ88696.1|  477|Homo sapiens papilin protein.
          Length = 477

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 387 SLLLHSRNRQGGGTYQCGLTRGPTTSKNIQ 476
           SL++H    +  GTY CG TR    S+ IQ
Sbjct: 161 SLIIHPLQAEDAGTYSCGSTRPGRDSQKIQ 190


>AK131073-1|BAC85123.1|  659|Homo sapiens FLJ00259 protein protein.
          Length = 659

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 387 SLLLHSRNRQGGGTYQCGLTRGPTTSKNIQ 476
           SL++H    +  GTY CG TR    S+ IQ
Sbjct: 343 SLIIHPLQAEDAGTYSCGSTRPGRDSQKIQ 372


>AK125658-1|BAC86235.1|  309|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43670 fis, clone SYNOV4007521. ).
          Length = 309

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 387 SLLLHSRNRQGGGTYQCGLTRGPTTSKNIQ 476
           SL++H    +  GTY CG TR    S+ IQ
Sbjct: 162 SLIIHPLQAEDAGTYSCGSTRPGRDSQKIQ 191


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,972,275
Number of Sequences: 237096
Number of extensions: 1968282
Number of successful extensions: 3834
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3834
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)