Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_I23
(790 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical pr... 307 7e-84
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 36 0.033
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical p... 28 6.6
Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical pr... 28 6.6
AC024859-12|AAK29966.1| 477|Caenorhabditis elegans Hypothetical... 28 6.6
Z99281-24|CAE18027.1| 155|Caenorhabditis elegans Hypothetical p... 28 8.8
>Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical
protein B0250.1 protein.
Length = 260
Score = 307 bits (753), Expect = 7e-84
Identities = 133/192 (69%), Positives = 163/192 (84%)
Frame = -3
Query: 782 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 603
MGR IR QRKGAG +F SH K RKGA KLR LDYAERHGYIKG+VKDIIHDPGRGAPLA+
Sbjct: 1 MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAI 60
Query: 602 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 423
+ FRDPYK+KT K +A EG++TGQF++CG KA +++GN++PVG +PEGT +CN+E K
Sbjct: 61 IAFRDPYKYKTVKTTVVAAEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKS 120
Query: 422 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 243
GDRG +ARASGN+ATVI HNPD K+TR++LPSGAKKV+ S NR M+G+VAGGGR DKP+L
Sbjct: 121 GDRGVIARASGNYATVIAHNPDTKKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLL 180
Query: 242 KAGRAYHKXQGQ 207
KAGR+YHK + +
Sbjct: 181 KAGRSYHKYKAK 192
Score = 70.1 bits (164), Expect = 2e-12
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = -2
Query: 168 NPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 61
NPVEHPHGGGNHQHIG STV+R SAG+KVGLIAA
Sbjct: 205 NPVEHPHGGGNHQHIGHPSTVRRDASAGKKVGLIAA 240
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1
Query: 214 KVKRNCWPYVRGVAMKP 164
K KRN WP VRGVAM P
Sbjct: 190 KAKRNSWPRVRGVAMNP 206
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -3
Query: 488 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 330
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 782 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAER 672
+GR R+ +KG F +HT K L+ LD A++
Sbjct: 464 IGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQ 500
>Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 671 HGYIKGVVKDIIHDPGRGAPLAVVHFR 591
HG + +V I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311
>Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 671 HGYIKGVVKDIIHDPGRGAPLAVVHFR 591
HG + +V I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311
>Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical
protein T24B8.1 protein.
Length = 134
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -3
Query: 374 IGHNPDAKRTRVKLPSGAKKVL 309
IGH D +RTR LP+G KKVL
Sbjct: 57 IGHGSD-RRTRFVLPNGYKKVL 77
>AC024859-12|AAK29966.1| 477|Caenorhabditis elegans Hypothetical
protein Y71H2AM.16 protein.
Length = 477
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 174 ATPRTYGQQLRLTLXLVVCPSSFQNRFVNTSTSSNNTDH 290
++P + ++LRL V+CP FV+T SN +H
Sbjct: 388 SSPESAPRELRLPGCDVLCPMETYQEFVSTRIISNKEEH 426
>Z99281-24|CAE18027.1| 155|Caenorhabditis elegans Hypothetical
protein Y57G11C.44 protein.
Length = 155
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -3
Query: 734 VSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 609
+S ++RK + LD+++ G K ++KDI +D + P+
Sbjct: 1 MSEVRQRKSSIIDSDLDFSDSDGEFKEIIKDIENDQWKDKPV 42
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,165,664
Number of Sequences: 27780
Number of extensions: 444131
Number of successful extensions: 1127
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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