Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_I20
         (793 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0498 + 19721038-19721178,19721376-19721472,19721576-197216...    28   7.4  
07_01_0215 - 1607473-1609494                                           28   7.4  

>12_02_0498 +
           19721038-19721178,19721376-19721472,19721576-19721619,
           19722120-19722203,19722441-19722662
          Length = 195

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
 Frame = -1

Query: 703 VYPCIFFKVTN-YYHDKCFKTCH*QQCMHSAKMXXXXXXXXXXXXXVKNHHSQLVKFIKK 527
           VYP     V N  YH  CFK CH         +              K+HH QL+K  K 
Sbjct: 117 VYPIERVTVNNTMYHKSCFKCCH-----GGCTISPSNYIAHEGKLYCKHHHIQLIK-EKG 170

Query: 526 NF 521
           NF
Sbjct: 171 NF 172


>07_01_0215 - 1607473-1609494
          Length = 673

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 404 YT*AICYCLYFYVYSEELFYFWKGFNHSNNKFDRLCTITK 523
           YT  +  CL  +V S E  + + GF  SN   D   TIT+
Sbjct: 3   YTFLLFLCLVSFVTSSEHQFVFSGFTGSNLVLDGAATITE 42


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,810,256
Number of Sequences: 37544
Number of extensions: 287644
Number of successful extensions: 435
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)