Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_I12
         (702 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162...    30   1.5  
04_04_1657 - 35102751-35102868,35102987-35103504,35104065-351042...    29   3.6  
04_04_1356 + 32854585-32854832,32854948-32855148,32855270-328554...    29   3.6  
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043...    29   4.7  
05_07_0311 - 29139883-29140359,29140641-29140788,29140883-291409...    28   8.3  

>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
            1625603-1625887,1626016-1626030,1626339-1626419,
            1626909-1627322,1627423-1627719,1627801-1629864
          Length = 3057

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 26/81 (32%), Positives = 39/81 (48%)
 Frame = -2

Query: 500  AMMPAESFAESLLSAMPDLEELLESEGINQLQQQXXXXXXXXXXXXPEEKPQTESEVLAT 321
            A+  AE F+ES LSA+    EL  + GI Q+                +E+   E    AT
Sbjct: 1752 AVSSAEKFSESNLSAV----EL--THGIQQVHYLETMEEMKGTEGTCDEEICYEQT--AT 1803

Query: 320  SENPKPTESAAPLSDISIKSD 258
            SE+P PT++   L D  ++S+
Sbjct: 1804 SEDPSPTDNGKSLQDYHVESN 1824


>04_04_1657 -
           35102751-35102868,35102987-35103504,35104065-35104211,
           35104289-35106262,35106964-35107089,35107178-35107264,
           35107335-35107424,35107725-35107811,35108248-35108300,
           35109339-35109387
          Length = 1082

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 19/68 (27%), Positives = 29/68 (42%)
 Frame = +1

Query: 259 SDFMEISLKGAADSVGFGFSDVAKTSDSV*GFSSGLGGEVTIGGFGFCCCN*LIPSDSNS 438
           +D  ++ +KGA+  +    S    TS    G  S   G+V + G   C       SDSN+
Sbjct: 206 TDVSDMQVKGASSDIRISVSSALSTSSHGSGDDSESFGDVYVWGEVMCDTTCRQGSDSNA 265

Query: 439 SSKSGIAD 462
            S +   D
Sbjct: 266 YSATAATD 273


>04_04_1356 +
           32854585-32854832,32854948-32855148,32855270-32855447,
           32856389-32856651,32856800-32857040,32857317-32858456,
           32858856-32858993
          Length = 802

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
 Frame = +1

Query: 58  IANKCILYHFLNLPPVICVAIV--ALATL-LXFSDVCSYASGCSNK-LASIDFSLCGRFC 225
           + +  I YH ++LPPVI + ++   L +L   F D  ++  G   K L +   ++C   C
Sbjct: 342 VTSDYITYHLVDLPPVITLGVLGGVLGSLHNFFLDKLTFRKGQKYKLLLAAVVTICTSCC 401

Query: 226 LF 231
           LF
Sbjct: 402 LF 403


>09_06_0147 + 21195222-21195377,21195471-21195522,21196842-21204362,
            21204453-21205031,21205176-21205484,21205638-21205718,
            21205971-21206279,21207430-21207816,21207964-21208767,
            21208856-21209218,21209437-21209667,21209934-21210278,
            21210494-21210712,21210759-21210815,21210978-21211322,
            21211538-21211756,21211803-21211859,21212022-21212366,
            21212584-21212814,21213100-21213458
          Length = 4322

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
 Frame = +2

Query: 464  IMIRQTTRPASWR*LARLREPENFPFHSDSDCILPYSQN-*VELPQRAPITRPTPLPHTL 640
            ++ ++TT+  SW+  +    P++ P H     + P S++    LP +     PT   H  
Sbjct: 2461 VVDKETTKSLSWQDRSLEASPDSTPTHG---YVHPTSRDEPAILPGQGAPQEPT---HPD 2514

Query: 641  LVDS*PSRKVSADALIG 691
             +DS  +R V+AD+L+G
Sbjct: 2515 ALDSASTRDVTADSLVG 2531


>05_07_0311 -
           29139883-29140359,29140641-29140788,29140883-29140959,
           29141227-29141387,29141785-29142803,29142905-29142996,
           29143117-29143256,29143397-29143574
          Length = 763

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 305 PTESAAPLSDISIKSDTPHNKEASVNKQKRPQR 207
           P ES +PL  +   SD+    E+S+N+Q+ P R
Sbjct: 174 PKESKSPLPPLPELSDSVGETESSINEQRCPIR 206


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,783,696
Number of Sequences: 37544
Number of extensions: 284114
Number of successful extensions: 936
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)