Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_I10
         (304 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   0.63 
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   0.83 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   1.4  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    20   5.8  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    20   5.8  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    20   7.7  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    20   7.7  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.4 bits (48), Expect = 0.63
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 99  EDYWNWPHASFEDCAG 52
           + Y +W  A +EDC+G
Sbjct: 110 QPYPDWSFAKYEDCSG 125


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.0 bits (47), Expect = 0.83
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 93  YWNWPHASFEDCAG 52
           Y +W  A +EDC+G
Sbjct: 113 YPDWSFAKYEDCSG 126


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 99  EDYWNWPHASFEDCAGGASV 40
           E Y NW  A  ++C+G  SV
Sbjct: 106 EPYPNWSWAKNQNCSGITSV 125


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +2

Query: 134 VILLQDIHIGRILIFECDMTIYHIFCITYGSYFGAY 241
           +IL  ++H+    + E  +    IF  T   Y+G +
Sbjct: 179 IILADELHLTEYKLVEKWVNSSEIFYTTSQQYYGHF 214


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 189 ISHSKIKMRPMWI 151
           + H+KI +RP W+
Sbjct: 222 LRHTKIWLRPDWL 234


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -1

Query: 253 PQASVSAEIRPIRYAEDVVDRHITFKN 173
           P      E+RPI+  +D  + +  +KN
Sbjct: 131 PPGRFFCEVRPIKRVKDSTNCNCGWKN 157


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 203 IFCITYGSYFGAY 241
           +FCIT+G   G +
Sbjct: 245 VFCITFGLVAGQF 257


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,157
Number of Sequences: 438
Number of extensions: 1800
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6368931
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)