Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_I09
         (305 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M69175-1|AAA36011.1|  173|Homo sapiens H-protein protein.              79   3e-15
D00723-1|BAA00625.1|  173|Homo sapiens protein ( Homo sapiens mR...    79   3e-15
BT009827-1|AAP88829.1|  173|Homo sapiens glycine cleavage system...    79   3e-15
BC020922-1|AAH20922.1|  173|Homo sapiens glycine cleavage system...    79   3e-15
BC000790-1|AAH00790.1|  173|Homo sapiens glycine cleavage system...    79   3e-15
AY533031-1|AAS59848.1|  125|Homo sapiens mitochondrial glycine c...    79   3e-15
AY310735-1|AAP50260.1|  173|Homo sapiens glycine cleavage system...    79   3e-15
CR457072-1|CAG33353.1|  173|Homo sapiens GCSH protein.                 78   4e-15
AY247105-1|AAO72160.1| 1543|Homo sapiens ATP-binding cassette su...    29   3.5  
AY247065-1|AAO72161.1| 1543|Homo sapiens ATP-binding cassette su...    29   3.5  
AY028900-1|AAK30025.1| 1543|Homo sapiens ATP-binding cassette A1...    29   3.5  

>M69175-1|AAA36011.1|  173|Homo sapiens H-protein protein.
          Length = 173

 Score = 78.6 bits (185), Expect = 3e-15
 Identities = 32/65 (49%), Positives = 49/65 (75%)
 Frame = -3

Query: 282 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFL 103
           ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ +   SE+++LM+EE Y+K++
Sbjct: 109 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYI 168

Query: 102 KTDAE 88
           K+  E
Sbjct: 169 KSIEE 173


>D00723-1|BAA00625.1|  173|Homo sapiens protein ( Homo sapiens mRNA
           for hydrogen carrier protein, a component of an enzyme
           complex, glycine synthase (EC 2.1.2.10). ).
          Length = 173

 Score = 78.6 bits (185), Expect = 3e-15
 Identities = 32/65 (49%), Positives = 49/65 (75%)
 Frame = -3

Query: 282 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFL 103
           ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ +   SE+++LM+EE Y+K++
Sbjct: 109 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYI 168

Query: 102 KTDAE 88
           K+  E
Sbjct: 169 KSIEE 173


>BT009827-1|AAP88829.1|  173|Homo sapiens glycine cleavage system
           protein H (aminomethyl carrier) protein.
          Length = 173

 Score = 78.6 bits (185), Expect = 3e-15
 Identities = 32/65 (49%), Positives = 49/65 (75%)
 Frame = -3

Query: 282 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFL 103
           ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ +   SE+++LM+EE Y+K++
Sbjct: 109 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYI 168

Query: 102 KTDAE 88
           K+  E
Sbjct: 169 KSIEE 173


>BC020922-1|AAH20922.1|  173|Homo sapiens glycine cleavage system
           protein H (aminomethyl carrier) protein.
          Length = 173

 Score = 78.6 bits (185), Expect = 3e-15
 Identities = 32/65 (49%), Positives = 49/65 (75%)
 Frame = -3

Query: 282 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFL 103
           ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ +   SE+++LM+EE Y+K++
Sbjct: 109 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYI 168

Query: 102 KTDAE 88
           K+  E
Sbjct: 169 KSIEE 173


>BC000790-1|AAH00790.1|  173|Homo sapiens glycine cleavage system
           protein H (aminomethyl carrier) protein.
          Length = 173

 Score = 78.6 bits (185), Expect = 3e-15
 Identities = 32/65 (49%), Positives = 49/65 (75%)
 Frame = -3

Query: 282 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFL 103
           ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ +   SE+++LM+EE Y+K++
Sbjct: 109 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYI 168

Query: 102 KTDAE 88
           K+  E
Sbjct: 169 KSIEE 173


>AY533031-1|AAS59848.1|  125|Homo sapiens mitochondrial glycine
           cleavage system H-protein precursor protein.
          Length = 125

 Score = 78.6 bits (185), Expect = 3e-15
 Identities = 32/65 (49%), Positives = 49/65 (75%)
 Frame = -3

Query: 282 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFL 103
           ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ +   SE+++LM+EE Y+K++
Sbjct: 61  ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYI 120

Query: 102 KTDAE 88
           K+  E
Sbjct: 121 KSIEE 125


>AY310735-1|AAP50260.1|  173|Homo sapiens glycine cleavage system
           protein H (aminomethyl carrier) protein.
          Length = 173

 Score = 78.6 bits (185), Expect = 3e-15
 Identities = 32/65 (49%), Positives = 49/65 (75%)
 Frame = -3

Query: 282 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFL 103
           ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ +   SE+++LM+EE Y+K++
Sbjct: 109 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYI 168

Query: 102 KTDAE 88
           K+  E
Sbjct: 169 KSIEE 173


>CR457072-1|CAG33353.1|  173|Homo sapiens GCSH protein.
          Length = 173

 Score = 78.2 bits (184), Expect = 4e-15
 Identities = 31/62 (50%), Positives = 48/62 (77%)
 Frame = -3

Query: 282 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFL 103
           ASE+YSPLSG VTE N+ + + P L+N SCY+ GWL ++ +   SE+++LM+EE Y+K++
Sbjct: 109 ASELYSPLSGEVTEINEALAENPGLVNKSCYEDGWLIKMTLSNPSELDELMSEEAYEKYI 168

Query: 102 KT 97
           K+
Sbjct: 169 KS 170


>AY247105-1|AAO72160.1| 1543|Homo sapiens ATP-binding cassette
            sub-family A member 10 protein.
          Length = 1543

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
 Frame = +1

Query: 109  FLVLFFSHEIIYLALLNYFQSKQPSFVITRCIY*C----WFVFYIFIFL 243
            FL+LF  H I Y   L +  S +  FV+  CI  C     F+ Y+  F+
Sbjct: 989  FLILFSIHLIYYFIFLGFQLSWELMFVLVVCIIGCAVSLIFLTYVLSFI 1037


>AY247065-1|AAO72161.1| 1543|Homo sapiens ATP-binding cassette
            sub-family A member 10 protein.
          Length = 1543

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
 Frame = +1

Query: 109  FLVLFFSHEIIYLALLNYFQSKQPSFVITRCIY*C----WFVFYIFIFL 243
            FL+LF  H I Y   L +  S +  FV+  CI  C     F+ Y+  F+
Sbjct: 989  FLILFSIHLIYYFIFLGFQLSWELMFVLVVCIIGCAVSLIFLTYVLSFI 1037


>AY028900-1|AAK30025.1| 1543|Homo sapiens ATP-binding cassette A10
            protein.
          Length = 1543

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
 Frame = +1

Query: 109  FLVLFFSHEIIYLALLNYFQSKQPSFVITRCIY*C----WFVFYIFIFL 243
            FL+LF  H I Y   L +  S +  FV+  CI  C     F+ Y+  F+
Sbjct: 989  FLILFSIHLIYYFIFLGFQLSWELMFVLVVCIIGCAVSLIFLTYVLSFI 1037


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,592,857
Number of Sequences: 237096
Number of extensions: 633812
Number of successful extensions: 1152
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1342408202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)