Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_I09
         (305 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83103-2|CAB05472.1|  148|Caenorhabditis elegans Hypothetical pr...    78   1e-15
Z71263-2|CAA95820.1|  146|Caenorhabditis elegans Hypothetical pr...    75   1e-14
U21324-5|AAN63436.1|  486|Caenorhabditis elegans Hypothetical pr...    27   2.0  
U21324-4|AAN63435.1|  537|Caenorhabditis elegans Hypothetical pr...    27   2.0  
Z83122-4|CAB05602.2|  664|Caenorhabditis elegans Hypothetical pr...    27   2.6  
Z92973-1|CAB07493.2|  323|Caenorhabditis elegans Hypothetical pr...    25   7.9  
Z72509-4|CAA96648.3|  405|Caenorhabditis elegans Hypothetical pr...    25   7.9  
Z29560-12|CAL22705.1|  395|Caenorhabditis elegans Hypothetical p...    25   7.9  

>Z83103-2|CAB05472.1|  148|Caenorhabditis elegans Hypothetical
           protein D1025.2 protein.
          Length = 148

 Score = 78.2 bits (184), Expect = 1e-15
 Identities = 33/65 (50%), Positives = 50/65 (76%)
 Frame = -3

Query: 282 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFL 103
           AS+IY+P+SG + EKN  +ED+P +IN S  +KGWL+RL+I    ++N+L+TEE+Y KF 
Sbjct: 82  ASDIYAPVSGKILEKNTKLEDEPGIINKSPLEKGWLYRLEITSNEQLNELLTEEQYNKF- 140

Query: 102 KTDAE 88
           K++ E
Sbjct: 141 KSEEE 145


>Z71263-2|CAA95820.1|  146|Caenorhabditis elegans Hypothetical
           protein F52A8.5 protein.
          Length = 146

 Score = 74.9 bits (176), Expect = 1e-14
 Identities = 31/63 (49%), Positives = 47/63 (74%)
 Frame = -3

Query: 282 ASEIYSPLSGTVTEKNKDVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFL 103
           AS+IY+P+SGTVT+KN  +E++  LIN S ++KGWL++LK+    E+  L+ EE+Y KF 
Sbjct: 80  ASDIYAPISGTVTQKNVKLEEEAGLINKSPFEKGWLYKLKVKSADELEKLLNEEQYAKFK 139

Query: 102 KTD 94
           K +
Sbjct: 140 KDE 142


>U21324-5|AAN63436.1|  486|Caenorhabditis elegans Hypothetical
           protein C35D10.7b protein.
          Length = 486

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 21/67 (31%), Positives = 34/67 (50%)
 Frame = -3

Query: 228 VEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFLKTDAEKPE*FKLN*RLFI 49
           V+D P+++  +   K W    +I+KQ     L   EE +K L+ D   P+  K+  + F+
Sbjct: 378 VKDVPSVVQLAKECKMWSAFERILKQYNFEPLKVFEELQKMLEKDYFLPK-GKIFCQ-FL 435

Query: 48  SNVESLF 28
            NV  LF
Sbjct: 436 LNVAQLF 442


>U21324-4|AAN63435.1|  537|Caenorhabditis elegans Hypothetical
           protein C35D10.7a protein.
          Length = 537

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 21/67 (31%), Positives = 34/67 (50%)
 Frame = -3

Query: 228 VEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFLKTDAEKPE*FKLN*RLFI 49
           V+D P+++  +   K W    +I+KQ     L   EE +K L+ D   P+  K+  + F+
Sbjct: 429 VKDVPSVVQLAKECKMWSAFERILKQYNFEPLKVFEELQKMLEKDYFLPK-GKIFCQ-FL 486

Query: 48  SNVESLF 28
            NV  LF
Sbjct: 487 LNVAQLF 493


>Z83122-4|CAB05602.2|  664|Caenorhabditis elegans Hypothetical
           protein R11A5.7 protein.
          Length = 664

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 15/51 (29%), Positives = 30/51 (58%)
 Frame = -3

Query: 231 DVEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEEEYKKFLKTDAEKPE 79
           + +DK ALI+ S +D+     L +IKQ ++ND   + ++ K   + ++K +
Sbjct: 29  NTDDKYALIHVSAHDEQ---SLHLIKQLQLNDFKYDLDFWKSPSSISDKAD 76


>Z92973-1|CAB07493.2|  323|Caenorhabditis elegans Hypothetical
           protein Y6G8.1 protein.
          Length = 323

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +1

Query: 61  LIQLKLFWFLSICFQKFLVLFFSHEIIYLALLNYFQSKQPSFVI 192
           ++ L LF+ L IC Q F +L F   I    L  YF      F+I
Sbjct: 101 ILMLFLFYVLYICMQAFHLLLFFLSIGRFTL--YFWPSSEKFLI 142


>Z72509-4|CAA96648.3|  405|Caenorhabditis elegans Hypothetical
           protein F32G8.4 protein.
          Length = 405

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -3

Query: 135 LMTEEEYKKFLKTDA 91
           LMTEEEY  ++ TDA
Sbjct: 152 LMTEEEYDLYMNTDA 166


>Z29560-12|CAL22705.1|  395|Caenorhabditis elegans Hypothetical
           protein K03H1.13 protein.
          Length = 395

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = -3

Query: 252 TVTEKNKD---VEDKPALINTSCYDKGWLFRLKIIKQSEINDLMTEE 121
           T+ E  KD   +ED+  L + SCY   W F  K ++   +   +TEE
Sbjct: 185 TIEEMRKDGAIMEDEMVLTD-SCYFMTWKFCKKFMENPLLRSPITEE 230


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,148,337
Number of Sequences: 27780
Number of extensions: 110317
Number of successful extensions: 327
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 327
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 323034540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)