Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_I06
         (389 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   1.3  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    22   6.9  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    22   6.9  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   9.1  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = +2

Query: 185 IEIQMATP---KPPTWSCQFIHALSREQNQVTTYA 280
           I++  ATP   +P TW    +H  +R  +Q+ TY+
Sbjct: 194 IDVCFATPSIARPETWE---VHEFARSDHQLITYS 225


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 350 RLLIQLKXKVHTFKILKRLGNY 285
           R + QLK K  + K+L  LG Y
Sbjct: 91  RTVTQLKSKYPSLKVLLGLGGY 112


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 157 VLPIKFYCTHRNSNGNTETT 216
           V+ +K+Y   RN+NG  + T
Sbjct: 421 VIDVKYYSRCRNTNGALQQT 440


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 271  NLRSQ*LPNLFNILKVC 321
            N   Q +P++FN+L VC
Sbjct: 1425 NALVQAIPSIFNVLLVC 1441


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 329,074
Number of Sequences: 2352
Number of extensions: 5555
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30356973
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)