Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_H24
         (763 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145638-1|AAD38613.1| 1055|Drosophila melanogaster l.2.35Df pro...   159   5e-39
AE014134-2631|AAF53481.1| 1055|Drosophila melanogaster CG4152-PA...   159   5e-39
AY061315-1|AAL28863.1| 1197|Drosophila melanogaster LD23303p pro...    59   6e-09
AE014297-3389|AAF56187.2| 1197|Drosophila melanogaster CG10210-P...    59   6e-09
AJ276896-1|CAC35050.1| 1197|Drosophila melanogaster putative hel...    58   1e-08
AY071407-1|AAL49029.1|  427|Drosophila melanogaster RE49394p pro...    30   3.0  
AE014134-2549|AAF53430.2|  427|Drosophila melanogaster CG3688-PA...    30   3.0  

>AF145638-1|AAD38613.1| 1055|Drosophila melanogaster l.2.35Df protein.
          Length = 1055

 Score =  159 bits (385), Expect = 5e-39
 Identities = 75/109 (68%), Positives = 92/109 (84%)
 Frame = -3

Query: 347  LQEYARRIAKVSIDSKMDLDEDTYVSKFKCTLMDVVLSWAKGASFLQICKMTDVFEGSII 168
            +Q+ ARRIAKVS + K+DLD DTYV KFK  LMDVVL+W KG+SFL +CKMTD+FEGSII
Sbjct: 948  MQDLARRIAKVSTECKLDLDADTYVDKFKPFLMDVVLAWCKGSSFLAVCKMTDIFEGSII 1007

Query: 167  RCMRRLEEVLRQLCQAAKNIGNTDLENKFSDAIKMLQEGHRVRSQSLYV 21
            RCMRRLEE+LRQ+CQA+K IGNTDLENKFS+ I++L+    V + SLY+
Sbjct: 1008 RCMRRLEELLRQMCQASKTIGNTDLENKFSEGIRLLKR-DIVFAASLYL 1055


>AE014134-2631|AAF53481.1| 1055|Drosophila melanogaster CG4152-PA
            protein.
          Length = 1055

 Score =  159 bits (385), Expect = 5e-39
 Identities = 75/109 (68%), Positives = 92/109 (84%)
 Frame = -3

Query: 347  LQEYARRIAKVSIDSKMDLDEDTYVSKFKCTLMDVVLSWAKGASFLQICKMTDVFEGSII 168
            +Q+ ARRIAKVS + K+DLD DTYV KFK  LMDVVL+W KG+SFL +CKMTD+FEGSII
Sbjct: 948  MQDLARRIAKVSTECKLDLDADTYVDKFKPFLMDVVLAWCKGSSFLAVCKMTDIFEGSII 1007

Query: 167  RCMRRLEEVLRQLCQAAKNIGNTDLENKFSDAIKMLQEGHRVRSQSLYV 21
            RCMRRLEE+LRQ+CQA+K IGNTDLENKFS+ I++L+    V + SLY+
Sbjct: 1008 RCMRRLEELLRQMCQASKTIGNTDLENKFSEGIRLLKR-DIVFAASLYL 1055


>AY061315-1|AAL28863.1| 1197|Drosophila melanogaster LD23303p protein.
          Length = 1197

 Score = 59.3 bits (137), Expect = 6e-09
 Identities = 27/61 (44%), Positives = 40/61 (65%)
 Frame = -3

Query: 254  LMDVVLSWAKGASFLQICKMTDVFEGSIIRCMRRLEEVLRQLCQAAKNIGNTDLENKFSD 75
            L++VV  WA+   F +I K+T V EG I+RC+++L E LR +  AA  IGN  L++K  +
Sbjct: 1119 LLEVVYEWARNKPFAEIMKLTTVQEGIIVRCIQQLNETLRDVKTAAIRIGNPGLQSKMEE 1178

Query: 74   A 72
            A
Sbjct: 1179 A 1179


>AE014297-3389|AAF56187.2| 1197|Drosophila melanogaster CG10210-PA
            protein.
          Length = 1197

 Score = 59.3 bits (137), Expect = 6e-09
 Identities = 27/61 (44%), Positives = 40/61 (65%)
 Frame = -3

Query: 254  LMDVVLSWAKGASFLQICKMTDVFEGSIIRCMRRLEEVLRQLCQAAKNIGNTDLENKFSD 75
            L++VV  WA+   F +I K+T V EG I+RC+++L E LR +  AA  IGN  L++K  +
Sbjct: 1119 LLEVVYEWARNKPFAEIMKLTTVQEGIIVRCIQQLNETLRDVKTAAIRIGNPGLQSKMEE 1178

Query: 74   A 72
            A
Sbjct: 1179 A 1179


>AJ276896-1|CAC35050.1| 1197|Drosophila melanogaster putative helicase
            Ski2 protein.
          Length = 1197

 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 26/61 (42%), Positives = 40/61 (65%)
 Frame = -3

Query: 254  LMDVVLSWAKGASFLQICKMTDVFEGSIIRCMRRLEEVLRQLCQAAKNIGNTDLENKFSD 75
            L++VV  WA+   F +I K+T V EG I+RC+++L E +R +  AA  IGN  L++K  +
Sbjct: 1119 LLEVVYEWARNKPFAEIMKLTTVQEGIIVRCIQQLNETVRDVKTAAIRIGNPGLQSKMEE 1178

Query: 74   A 72
            A
Sbjct: 1179 A 1179


>AY071407-1|AAL49029.1|  427|Drosophila melanogaster RE49394p
           protein.
          Length = 427

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = -3

Query: 242 VLSWAKGASFLQICKMTDVFEGSIIRCMRRLEEVLRQ 132
           +L W K A    IC  TD+ E S+ +C RR +++L++
Sbjct: 150 LLKWEKAAISHLIC--TDIAEVSVEQCQRRYQDILQR 184


>AE014134-2549|AAF53430.2|  427|Drosophila melanogaster CG3688-PA
           protein.
          Length = 427

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = -3

Query: 242 VLSWAKGASFLQICKMTDVFEGSIIRCMRRLEEVLRQ 132
           +L W K A    IC  TD+ E S+ +C RR +++L++
Sbjct: 150 LLKWEKAAISHLIC--TDIAEVSVEQCQRRYQDILQR 184


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,768,379
Number of Sequences: 53049
Number of extensions: 692715
Number of successful extensions: 1631
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1629
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)