Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_H24
         (763 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical pr...   114   6e-26
Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical pr...    57   2e-08
Z37093-6|CAJ85783.1|  176|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z37093-5|CAJ85782.1|  212|Caenorhabditis elegans Hypothetical pr...    31   1.2  
CU457740-11|CAM36341.1|  353|Caenorhabditis elegans Hypothetical...    28   6.3  
AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical ...    28   8.3  

>Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical protein
            W08D2.7 protein.
          Length = 1026

 Score =  114 bits (275), Expect = 6e-26
 Identities = 61/109 (55%), Positives = 75/109 (68%)
 Frame = -3

Query: 347  LQEYARRIAKVSIDSKMDLDEDTYVSKFKCTLMDVVLSWAKGASFLQICKMTDVFEGSII 168
            L E AR +AKVS + KM++ ED YVS F   LMDVV  W  GA+F +I K TDVFEGSII
Sbjct: 919  LHEQARNVAKVSNECKMEVMEDKYVSSFNPGLMDVVYQWVNGATFSEIVKTTDVFEGSII 978

Query: 167  RCMRRLEEVLRQLCQAAKNIGNTDLENKFSDAIKMLQEGHRVRSQSLYV 21
            R +RRLEEVLR++  AAK + N +LE KF DA K L+    V + SLY+
Sbjct: 979  RTLRRLEEVLREMINAAKALANKELEQKFEDARKNLKR-DIVFAASLYL 1026


>Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical protein
            F01G4.3 protein.
          Length = 1266

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 25/60 (41%), Positives = 38/60 (63%)
 Frame = -3

Query: 254  LMDVVLSWAKGASFLQICKMTDVFEGSIIRCMRRLEEVLRQLCQAAKNIGNTDLENKFSD 75
            LM+VV  WA G  F QI +MTD  EG I++C++RL+EV + +  A + +G+  L  K  +
Sbjct: 1188 LMEVVYEWANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAGRIVGDPALVEKMEE 1247


>Z37093-6|CAJ85783.1|  176|Caenorhabditis elegans Hypothetical
           protein ZK669.5b protein.
          Length = 176

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = -3

Query: 380 SVEYLIVIYIFLQEYARRIAKVSIDSKMDLDEDTYVSK 267
           S EY + +Y  +Q+   RI  V I++K+D+ ED+ + K
Sbjct: 83  SFEYTLELYNEIQKSTERIPLVFIENKIDIVEDSQMDK 120


>Z37093-5|CAJ85782.1|  212|Caenorhabditis elegans Hypothetical
           protein ZK669.5a protein.
          Length = 212

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = -3

Query: 380 SVEYLIVIYIFLQEYARRIAKVSIDSKMDLDEDTYVSK 267
           S EY + +Y  +Q+   RI  V I++K+D+ ED+ + K
Sbjct: 83  SFEYTLELYNEIQKSTERIPLVFIENKIDIVEDSQMDK 120


>CU457740-11|CAM36341.1|  353|Caenorhabditis elegans Hypothetical
           protein C50E10.11 protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 599 FLIQYYRLLHTCIINILLYREVKGYLRDTYNFTTESYLKV 718
           F   Y  LL+TC++ I + R    +L + Y  T   YL+V
Sbjct: 131 FTWYYMILLNTCLLFISIERRFATWLIENYENTARVYLRV 170


>AC024796-3|AAK29895.4| 1161|Caenorhabditis elegans Hypothetical
           protein Y48G1C.5 protein.
          Length = 1161

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -3

Query: 152 LEEVLRQLCQAAKNIGNTDLENKFSDAIKMLQEG 51
           LE+ L +L +  K++GN     +  DA+K L +G
Sbjct: 695 LEKSLEKLVELVKDVGNKKSLGEVQDALKSLDDG 728


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,541,847
Number of Sequences: 27780
Number of extensions: 384883
Number of successful extensions: 948
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)