Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_H18
(820 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical pr... 108 5e-24
U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical pr... 79 3e-15
U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical pr... 32 0.57
U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase ... 30 1.7
U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase ... 30 1.7
J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein ( C.ele... 30 1.7
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 30 2.3
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 30 2.3
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 30 2.3
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 30 2.3
S57284-1|AAB25906.1| 437|Caenorhabditis elegans S-adenosylhomoc... 29 4.0
M64306-1|AAA28062.1| 437|Caenorhabditis elegans S-adenosylhomoc... 29 4.0
AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical ... 29 4.0
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 29 5.3
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 29 5.3
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 29 5.3
U64862-2|AAZ32793.1| 372|Caenorhabditis elegans Lin-5 (five) in... 29 5.3
AL117203-3|CAB55101.1| 448|Caenorhabditis elegans Hypothetical ... 29 5.3
U58756-6|AAY44007.1| 286|Caenorhabditis elegans Hypothetical pr... 28 7.0
U23513-5|AAP68948.1| 214|Caenorhabditis elegans Hypothetical pr... 28 7.0
U23513-4|AAP68947.1| 322|Caenorhabditis elegans Hypothetical pr... 28 7.0
AC025724-2|AAG23378.2| 167|Caenorhabditis elegans Hypothetical ... 28 9.2
>Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical
protein C31C9.2 protein.
Length = 322
Score = 108 bits (259), Expect = 5e-24
Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 1/237 (0%)
Frame = -2
Query: 810 GHDHIDVAECKKRGVRIGYTPDVXXXXXXXXXXXXXXXTSRRVPEAIHEAKTGGWVSWAP 631
G D+IDV + + TP SR VP+A K G WA
Sbjct: 79 GVDNIDVPAASANKILVMNTPQANSRSAAELTCTLILSLSRHVPQAAASMKAG---KWAR 135
Query: 630 TWMTGPGLAGATVGIVGFGRIGQAVARRVKAFNTERIIYFNRSHRPEEKETGAVK-VSFD 454
G + G T+ ++G GRIG VA R++AF ++I F+ E+ E ++ +S +
Sbjct: 136 KDFMGEEVYGRTLAVLGLGRIGSEVAVRLQAFGM-KVIGFDPMVTKEQAEAKNIELLSLE 194
Query: 453 ELLTQSDFVICCAALVPETKEIFNKEAFEKMKDTAIFVNTSRGGTVDQDALIEALKTNKI 274
++ Q+D++ L+ +T+ + NKE K K +N +RGG V++ L+E+L
Sbjct: 195 QIWPQADYITVHVPLIKQTENLINKETLAKCKKGVRIINVARGGIVNEVDLVESLNAGHA 254
Query: 273 RAAGLDVTSPEPLPLDNPLFKLSNCVVLPHIGSATIEARNTMSELTARNILAALHGT 103
+ A DV EP P L + PH+G++TI+A+ ++ A NI+ GT
Sbjct: 255 KGAAFDVFEQEP-PTFRELIDHPLVIATPHLGASTIDAQLRVASEIADNIVQYNKGT 310
>U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical
protein F49E10.5 protein.
Length = 727
Score = 79.4 bits (187), Expect = 3e-15
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Frame = -2
Query: 603 GATVGIVGFGRIGQAVARRVKAFNTERIIYFNRSHRPEEKETGAVKV-SFDELLTQSDFV 427
G+ +GI+G GR+G AV R +AF I Y +K G +V + DE +++SD +
Sbjct: 325 GSVLGILGCGRVGTAVGLRARAFGLHIIFYDPFVREGHDKALGFERVYTMDEFMSRSDCI 384
Query: 426 ICCAALVPETKEIFNKEAFEKMKDTAIFVNTSRGGTVDQDALIEALKTNKIRAAGLDVTS 247
L ET+ I N ++ + K VNTS G ++++ L ALK ++ A LDV
Sbjct: 385 SLHCNLGDETRGIINADSLRQCKSGVYIVNTSHAGLINENDLAAALKNGHVKGAALDVHD 444
Query: 246 P---EPLPLDNPLFKLSNCVVLPHIGSATIEARNTMSELTARNILAALHG 106
+P L NPL N + PH T + + A+ I A++G
Sbjct: 445 SVRFDPNCL-NPLVGCPNIINTPHSAWMTEASCKDLRINAAKEIRKAING 493
>U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical
protein ZK354.8 protein.
Length = 483
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 566 PILPNPTMPTVAPASPGPVIQVGAHETQPPVLAS 667
P P P P VAP P P + A QPPV+ S
Sbjct: 94 PSDPPPPPPPVAPHQPPPQLATSAQPPQPPVINS 127
>U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase
protein 2, isoform a protein.
Length = 366
Score = 30.3 bits (65), Expect = 1.7
Identities = 34/136 (25%), Positives = 61/136 (44%)
Frame = -2
Query: 462 SFDELLTQSDFVICCAALVPETKEIFNKEAFEKMKDTAIFVNTSRGGTVDQDALIEALKT 283
+ +L+ ++ V+C P+ +F K+ FEK+ + + D D ++E K
Sbjct: 21 NIQQLVKEAIVVLCIHK--PDNPVLFLKDHFEKLNEQRAQEGGNPDAADDDDIIVEPPKR 78
Query: 282 NKIRAAGLDVTSPEPLPLDNPLFKLSNCVVLPHIGSATIEARNTMSELTARNILAALHGT 103
+ R G+ S EP+ D+ +K VV+P AT R ++ +N+L A
Sbjct: 79 SGGRRTGI---SAEPIKEDDTEYKK---VVIPK-DDAT---RRSLESAMRKNLLFAHLEE 128
Query: 102 DMPAELK*NFDSYFKI 55
D E K +D+ F +
Sbjct: 129 D---EQKTMYDAMFPV 141
>U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase
protein 2, isoform c protein.
Length = 376
Score = 30.3 bits (65), Expect = 1.7
Identities = 34/136 (25%), Positives = 61/136 (44%)
Frame = -2
Query: 462 SFDELLTQSDFVICCAALVPETKEIFNKEAFEKMKDTAIFVNTSRGGTVDQDALIEALKT 283
+ +L+ ++ V+C P+ +F K+ FEK+ + + D D ++E K
Sbjct: 31 NIQQLVKEAIVVLCIHK--PDNPVLFLKDHFEKLNEQRAQEGGNPDAADDDDIIVEPPKR 88
Query: 282 NKIRAAGLDVTSPEPLPLDNPLFKLSNCVVLPHIGSATIEARNTMSELTARNILAALHGT 103
+ R G+ S EP+ D+ +K VV+P AT R ++ +N+L A
Sbjct: 89 SGGRRTGI---SAEPIKEDDTEYKK---VVIPK-DDAT---RRSLESAMRKNLLFAHLEE 138
Query: 102 DMPAELK*NFDSYFKI 55
D E K +D+ F +
Sbjct: 139 D---EQKTMYDAMFPV 151
>J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein (
C.elegans cAMP-dependentprotein kinase subunit R mRNA,
complete cds. ).
Length = 376
Score = 30.3 bits (65), Expect = 1.7
Identities = 34/136 (25%), Positives = 61/136 (44%)
Frame = -2
Query: 462 SFDELLTQSDFVICCAALVPETKEIFNKEAFEKMKDTAIFVNTSRGGTVDQDALIEALKT 283
+ +L+ ++ V+C P+ +F K+ FEK+ + + D D ++E K
Sbjct: 31 NIQQLVKEAIVVLCIHK--PDNPVLFLKDHFEKLNEQRAQEGGNPDAADDDDIIVEPPKR 88
Query: 282 NKIRAAGLDVTSPEPLPLDNPLFKLSNCVVLPHIGSATIEARNTMSELTARNILAALHGT 103
+ R G+ S EP+ D+ +K VV+P AT R ++ +N+L A
Sbjct: 89 SGGRRTGI---SAEPIKEDDTEYKK---VVIPK-DDAT---RRSLESAMRKNLLFAHLEE 138
Query: 102 DMPAELK*NFDSYFKI 55
D E K +D+ F +
Sbjct: 139 D---EQKTMYDAMFPV 151
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 609 LAGATVGIVGFGRIGQAVARRVKAFNTERIIYFN 508
++ A VGI GFGRIG+ V R +T +++ N
Sbjct: 1 MSKANVGINGFGRIGRLVLRAAVEKDTVQVVAVN 34
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 609 LAGATVGIVGFGRIGQAVARRVKAFNTERIIYFN 508
++ A VGI GFGRIG+ V R +T +++ N
Sbjct: 1 MSKANVGINGFGRIGRLVLRAAVEKDTVQVVAVN 34
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 609 LAGATVGIVGFGRIGQAVARRVKAFNTERIIYFN 508
++ A VGI GFGRIG+ V R +T +++ N
Sbjct: 1 MSKANVGINGFGRIGRLVLRAAVEKDTVQVVAVN 34
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 609 LAGATVGIVGFGRIGQAVARRVKAFNTERIIYFN 508
++ A VGI GFGRIG+ V R +T +++ N
Sbjct: 1 MSKANVGINGFGRIGRLVLRAAVEKDTVQVVAVN 34
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 609 LAGATVGIVGFGRIGQAVARRVKAFNTERIIYFN 508
++ A VGI GFGRIG+ V R +T +++ N
Sbjct: 1 MSKANVGINGFGRIGRLVLRAAVEKDTVQVVAVN 34
>S57284-1|AAB25906.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 29.1 bits (62), Expect = 4.0
Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Frame = -2
Query: 609 LAGATVGIVGFGRIGQAVARRVKAFNTERII-YFNRSHRPEEKETGAVKVSFDELLTQSD 433
LAG + G+G +G+ A +KAF + I+ + + + G + +E +++
Sbjct: 213 LAGKVAVVAGYGDVGKGSAASLKAFGSRVIVTEIDPINALQAAMEGYEVTTLEEAAPKAN 272
Query: 432 FVICCAALVPETKEIFNKEAFEKMKDTAIFVNTSRGGTVDQDALIEALKTN 280
++ K+I + FE + + AI N G D + ++ L TN
Sbjct: 273 IIVTTTG----CKDIVTGKHFELLPNDAIVCNV---GHFDCEIDVKWLNTN 316
>M64306-1|AAA28062.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 29.1 bits (62), Expect = 4.0
Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Frame = -2
Query: 609 LAGATVGIVGFGRIGQAVARRVKAFNTERII-YFNRSHRPEEKETGAVKVSFDELLTQSD 433
LAG + G+G +G+ A +KAF + I+ + + + G + +E +++
Sbjct: 213 LAGKVAVVAGYGDVGKGSAASLKAFGSRVIVTEIDPINALQAAMEGYEVTTLEEAAPKAN 272
Query: 432 FVICCAALVPETKEIFNKEAFEKMKDTAIFVNTSRGGTVDQDALIEALKTN 280
++ K+I + FE + + AI N G D + ++ L TN
Sbjct: 273 IIVTTTG----CKDIVTGKHFELLPNDAIVCNV---GHFDCEIDVKWLNTN 316
>AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical
protein K02F2.2 protein.
Length = 437
Score = 29.1 bits (62), Expect = 4.0
Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Frame = -2
Query: 609 LAGATVGIVGFGRIGQAVARRVKAFNTERII-YFNRSHRPEEKETGAVKVSFDELLTQSD 433
LAG + G+G +G+ A +KAF + I+ + + + G + +E +++
Sbjct: 213 LAGKVAVVAGYGDVGKGSAASLKAFGSRVIVTEIDPINALQAAMEGYEVTTLEEAAPKAN 272
Query: 432 FVICCAALVPETKEIFNKEAFEKMKDTAIFVNTSRGGTVDQDALIEALKTN 280
++ K+I + FE + + AI N G D + ++ L TN
Sbjct: 273 IIVTTTG----CKDIVTGKHFELLPNDAIVCNV---GHFDCEIDVKWLNTN 316
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 566 PILPNPTMPTVAPASPGPVIQVGAHETQPPV 658
P P P P V PA P P + T PP+
Sbjct: 75 PSAPGPIRPVVNPAPPLPTLPTPPPSTLPPI 105
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = +1
Query: 544 NPSCYCL-TYSPKSN-NANSGTSQSRSCHP 627
NPS + L T SP S ANS +S SRSC P
Sbjct: 29 NPSSHALRTLSPVSPPTANSSSSTSRSCSP 58
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = +1
Query: 544 NPSCYCL-TYSPKSN-NANSGTSQSRSCHP 627
NPS + L T SP S ANS +S SRSC P
Sbjct: 29 NPSSHALRTLSPVSPPTANSSSSTSRSCSP 58
>U64862-2|AAZ32793.1| 372|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform e protein.
Length = 372
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = +1
Query: 544 NPSCYCL-TYSPKSN-NANSGTSQSRSCHP 627
NPS + L T SP S ANS +S SRSC P
Sbjct: 29 NPSSHALRTLSPVSPPTANSSSSTSRSCSP 58
>AL117203-3|CAB55101.1| 448|Caenorhabditis elegans Hypothetical
protein Y48C3A.4 protein.
Length = 448
Score = 28.7 bits (61), Expect = 5.3
Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Frame = +2
Query: 350 AVSFIFSNASLLNISLVSGTSAAQQITKSLWVRSSSKLTLTAPVSFSSGL*LRLK*MILS 529
A + S A N ++ +Q T ++W + TLT P S L +I
Sbjct: 14 AAAAAVSAAPQQNPMMLFSPMTSQATTPTVWPIKPTVNTLTPPPVQSIDANLAACILIQQ 73
Query: 530 VL-NALTLRATA*PILPN--PTMPTVAPASPGPVIQVGAHETQPPVLAS 667
L N L A + PILP+ PT P++ SP + P +++S
Sbjct: 74 ALQNQQALAAASSPILPSPTPTFPSLPLFSPTVPTSLPTPTLTPTIISS 122
>U58756-6|AAY44007.1| 286|Caenorhabditis elegans Hypothetical
protein F58F9.9 protein.
Length = 286
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +1
Query: 568 YSPKSNNANSGTSQSRSCHPSGCP-*NPTT 654
Y P SNN S+ PSGCP NPTT
Sbjct: 134 YKPNSNNTAYVRSRKCLSGPSGCPCVNPTT 163
>U23513-5|AAP68948.1| 214|Caenorhabditis elegans Hypothetical
protein D2021.2b protein.
Length = 214
Score = 28.3 bits (60), Expect = 7.0
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 10/105 (9%)
Frame = +1
Query: 334 CIYKNGCI----LHLFKRFLVEYLFSFRN*CCTTNHKVALG------EEFIETDFDSTSF 483
C + N C+ + F F++ S C T+H L EEF+ETD
Sbjct: 78 CPWLNSCVTRRNMREFIMFVISVSVSSAIYCMATSHYALLQIEDHGLEEFLETDAFLMIT 137
Query: 484 LLFRSMTAIKINDSFCVECFNPSCYCLTYSPKSNNANSGTSQSRS 618
++ +M A+ + FCV+ N +T + + +G + S S
Sbjct: 138 IILSAMHALMLAVLFCVQ-MNQISQGVTTNDRIKARRAGHAHSHS 181
>U23513-4|AAP68947.1| 322|Caenorhabditis elegans Hypothetical
protein D2021.2a protein.
Length = 322
Score = 28.3 bits (60), Expect = 7.0
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 10/105 (9%)
Frame = +1
Query: 334 CIYKNGCI----LHLFKRFLVEYLFSFRN*CCTTNHKVALG------EEFIETDFDSTSF 483
C + N C+ + F F++ S C T+H L EEF+ETD
Sbjct: 186 CPWLNSCVTRRNMREFIMFVISVSVSSAIYCMATSHYALLQIEDHGLEEFLETDAFLMIT 245
Query: 484 LLFRSMTAIKINDSFCVECFNPSCYCLTYSPKSNNANSGTSQSRS 618
++ +M A+ + FCV+ N +T + + +G + S S
Sbjct: 246 IILSAMHALMLAVLFCVQ-MNQISQGVTTNDRIKARRAGHAHSHS 289
>AC025724-2|AAG23378.2| 167|Caenorhabditis elegans Hypothetical
protein Y67D8C.4 protein.
Length = 167
Score = 27.9 bits (59), Expect = 9.2
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +1
Query: 337 IYKNGCILHLFKRFLVEYLFSF 402
++ +GC+ H FK+F+ + F+F
Sbjct: 127 LHFSGCLSHFFKQFIFSWFFAF 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,192,020
Number of Sequences: 27780
Number of extensions: 366997
Number of successful extensions: 1129
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1124
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -