Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_pT_H14
         (664 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M55284-1|AAA60100.1|  682|Homo sapiens protein kinase C-L protein.     35   0.23 
BC037268-1|AAH37268.1|  683|Homo sapiens protein kinase C, eta p...    35   0.23 

>M55284-1|AAA60100.1|  682|Homo sapiens protein kinase C-L protein.
          Length = 682

 Score = 35.1 bits (77), Expect = 0.23
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 486 EVQWGFHTHRLVSPKF-VR*HGRERVGTF-PCFLKNEPVVQPI 608
           E+ W    HR + P F  R   RE V  F P F+K EPV+ PI
Sbjct: 615 EIDWAQLNHRQIEPPFRPRIKSREDVSNFDPDFIKEEPVLTPI 657


>BC037268-1|AAH37268.1|  683|Homo sapiens protein kinase C, eta
           protein.
          Length = 683

 Score = 35.1 bits (77), Expect = 0.23
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 486 EVQWGFHTHRLVSPKF-VR*HGRERVGTF-PCFLKNEPVVQPI 608
           E+ W    HR + P F  R   RE V  F P F+K EPV+ PI
Sbjct: 616 EIDWAQLNHRQIEPPFRPRIKSREDVSNFDPDFIKEEPVLTPI 658


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,030,647
Number of Sequences: 237096
Number of extensions: 2131650
Number of successful extensions: 11334
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11334
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)