Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_H12
(350 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 1.4
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 1.4
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 1.4
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 1.4
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 1.4
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 1.4
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 2.4
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 2.4
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 3.2
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 5.6
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 20 7.4
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 20 7.4
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 20 7.4
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 20 7.4
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 20 7.4
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 20 7.4
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 20 7.4
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 20 9.8
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 1.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 89 LATTLSKNNIHNSNQRGN 142
+ ++LS N IHN+N + N
Sbjct: 80 IISSLSNNTIHNNNYKYN 97
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 1.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 89 LATTLSKNNIHNSNQRGN 142
+ ++LS N IHN+N + N
Sbjct: 80 IISSLSNNTIHNNNYKYN 97
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 1.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 89 LATTLSKNNIHNSNQRGN 142
+ ++LS N IHN+N + N
Sbjct: 81 IISSLSNNTIHNNNYKYN 98
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 1.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 89 LATTLSKNNIHNSNQRGN 142
+ ++LS N IHN+N + N
Sbjct: 81 IISSLSNNTIHNNNYKYN 98
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 1.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 89 LATTLSKNNIHNSNQRGN 142
+ ++LS N IHN+N + N
Sbjct: 81 IISSLSNNTIHNNNYKYN 98
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 1.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 89 LATTLSKNNIHNSNQRGN 142
+ ++LS N IHN+N + N
Sbjct: 81 IISSLSNNTIHNNNYKYN 98
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 2.4
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 278 ARFQYRQKIKQIRTH 234
+R QYR+K+KQ+ +
Sbjct: 384 SRRQYREKVKQVEEY 398
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 2.4
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 278 ARFQYRQKIKQIRTH 234
+R QYR+K+KQ+ +
Sbjct: 352 SRRQYREKVKQVEEY 366
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 3.2
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +2
Query: 89 LATTLSKNNIHNSNQRGNVF 148
+ ++LS N IHN+N ++
Sbjct: 314 IISSLSNNTIHNNNYNKKLY 333
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 20.6 bits (41), Expect = 5.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -2
Query: 202 DSCQF*HVTTEVSHRLSTKYIPALIRI 122
D C F + + LS+ YIP +I +
Sbjct: 334 DQCLFYNTDFIIYSSLSSFYIPCIIMV 360
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 20.2 bits (40), Expect = 7.4
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = +2
Query: 116 IHNSNQRGNVFCTQTMADFSSDMSKLTAVNSCHSPMNF 229
+H+ N+ + D + +T+VNS SP F
Sbjct: 383 VHSFPSTLNIPSVKIDEDQKCSIESITSVNSTSSPKPF 420
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 7.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 89 LATTLSKNNIHNSNQRGN 142
+ ++LS IHN+N N
Sbjct: 81 IISSLSNKTIHNNNNYNN 98
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 20.2 bits (40), Expect = 7.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 89 LATTLSKNNIHNSNQRGN 142
+ ++LS IHN+N N
Sbjct: 81 IISSLSNKTIHNNNNYNN 98
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 20.2 bits (40), Expect = 7.4
Identities = 7/28 (25%), Positives = 16/28 (57%)
Frame = +3
Query: 99 HSLKIIFIILINAGMYFVLKRWLTSVVT 182
H L++ I + + F+L WL ++++
Sbjct: 145 HPLRVYTISGLKRPIRFILAAWLIALIS 172
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.2 bits (40), Expect = 7.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 89 LATTLSKNNIHNSNQRGN 142
+ ++LS IHN+N N
Sbjct: 314 IISSLSNKTIHNNNNYNN 331
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.2 bits (40), Expect = 7.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 89 LATTLSKNNIHNSNQRGN 142
+ ++LS IHN+N N
Sbjct: 303 IISSLSNKTIHNNNNYNN 320
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 20.2 bits (40), Expect = 7.4
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 86 NLATTLSKNNIHNSNQRGN 142
N T S NN +N+N N
Sbjct: 232 NANTNASNNNNNNNNNNNN 250
Score = 20.2 bits (40), Expect = 7.4
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +2
Query: 110 NNIHNSNQRGNVFC 151
N N+N G++FC
Sbjct: 261 NGASNNNNNGDMFC 274
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 19.8 bits (39), Expect = 9.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 169 VSHRLSTKYIPALIRIMNIIFRE 101
V + LST P L IM+ FRE
Sbjct: 335 VFYYLSTTVNPLLYNIMSNKFRE 357
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,206
Number of Sequences: 438
Number of extensions: 1578
Number of successful extensions: 19
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8060325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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