Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_pT_H11
(490 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0213 - 15912048-15912716 32 0.28
06_01_0178 + 1386981-1387505 32 0.28
10_08_0223 - 15986763-15987575 31 0.38
12_01_0841 - 7873458-7874225 31 0.50
10_08_0239 - 16099673-16100251 31 0.50
10_08_0238 - 16093780-16094355 29 2.0
10_08_0220 - 15977247-15977804 29 2.0
10_08_0240 - 16106963-16107538 29 2.6
10_08_0241 - 16111792-16112367 28 3.5
07_03_0560 + 19479597-19480667 28 3.5
04_04_1416 - 33411900-33412148,33412735-33412854,33412986-334132... 28 3.5
07_03_0563 - 19542116-19542217,19542631-19542712,19543823-195445... 28 4.6
07_03_0559 + 19475893-19476783 28 4.6
07_03_0177 - 14770777-14772045 28 4.6
05_06_0052 + 25199253-25199304,25199676-25199949,25200709-25201069 28 4.6
02_05_0149 + 26290236-26290880 28 4.6
01_06_0430 + 29299970-29300031,29300162-29300294,29301057-293011... 28 4.6
10_08_0217 - 15962192-15962884 27 6.1
12_01_0840 - 7847239-7847531,7847576-7847675,7848312-7848388,784... 27 8.1
09_04_0179 - 15366119-15366916 27 8.1
06_02_0120 + 12055076-12055175,12055322-12055725 27 8.1
05_06_0005 + 24802843-24803101,24804086-24804333,24804417-248045... 27 8.1
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 27 8.1
04_04_1158 - 31342934-31343272,31343508-31343658,31343745-313439... 27 8.1
03_02_0765 + 11000724-11002496 27 8.1
01_01_1069 - 8420454-8420670,8421272-8421447,8421556-8421738,842... 27 8.1
>10_08_0213 - 15912048-15912716
Length = 222
Score = 31.9 bits (69), Expect = 0.28
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
G+GSG + +G +G G G G G +GG +G+ S G G
Sbjct: 133 GYGSGYGSGAGGASGGGGGHGGGGGGGQGGGYGSGSGYGSG 173
>06_01_0178 + 1386981-1387505
Length = 174
Score = 31.9 bits (69), Expect = 0.28
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
G G G G GRG G+ G G RGGD G+ G G
Sbjct: 92 GGGGGGGGGKGRKGGRGGDGGSGGAGGRGGDGGSGGQGGRG 132
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +3
Query: 96 GSGMHNRSGVHNGRGVHKGTCGVGQRGGDFG 188
G G SG GRG G+ G G RGGD G
Sbjct: 106 GRGGDGGSGGAGGRGGDGGSGGQGGRGGDGG 136
>10_08_0223 - 15986763-15987575
Length = 270
Score = 31.5 bits (68), Expect = 0.38
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
G G G G +G G G G G+ GGD GN N G G
Sbjct: 42 GGGGGGGTNGGWGSGSGAGAGA-GYGESGGDSGNTWNYGRG 81
>12_01_0841 - 7873458-7874225
Length = 255
Score = 31.1 bits (67), Expect = 0.50
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 90 GHGSGMHNRSGVH-NGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
G+GSG GVH G G G G G +GG G+ S G G
Sbjct: 205 GYGSGYGQGGGVHAGGYGQGGGGGGGGGQGGGSGSGSGYGSG 246
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/33 (51%), Positives = 18/33 (54%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFG 188
G+GSG SG G GVH G G GQ GG G
Sbjct: 201 GYGSGYG--SGYGQGGGVHAG--GYGQGGGGGG 229
>10_08_0239 - 16099673-16100251
Length = 192
Score = 31.1 bits (67), Expect = 0.50
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = +3
Query: 87 VGHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
+G GSG NR G H G G G Q GG G+ S G G
Sbjct: 54 IGAGSGSSNRYGAHASGGGGGGGGGYSQYGGS-GSGSGYGTG 94
>10_08_0238 - 16093780-16094355
Length = 191
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +3
Query: 87 VGHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
VG GSG N G H G G G Q GG G+ S G G
Sbjct: 54 VGAGSGSSNSYGAHASGGGGGGGGGYSQYGGS-GSGSGYGTG 94
>10_08_0220 - 15977247-15977804
Length = 185
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGT-CGVGQRGGDFGNFSNVGEG 212
G GSG G G G G+ G GQ GGD S GEG
Sbjct: 31 GGGSGEGGGGGSDGGSGWGSGSGSGYGQAGGDGSYASGGGEG 72
>10_08_0240 - 16106963-16107538
Length = 191
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +3
Query: 87 VGHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
+G GSG N G H G G G Q GG G+ S G G
Sbjct: 54 IGAGSGSSNYYGAHASGGGGGGGGGYSQYGGS-GSGSGYGSG 94
>10_08_0241 - 16111792-16112367
Length = 191
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEGL 215
G GSG N G H G G G Q GG G+ S G GL
Sbjct: 55 GVGSGSSNYYGAHASGGGGGGGGGYSQYGGS-GSGSGYGTGL 95
>07_03_0560 + 19479597-19480667
Length = 356
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
G G G+ G G G G G G +GG FG VG G
Sbjct: 119 GEGGGLGGGGGGGLGGGGGGGVGGGGGQGGGFGAGGGVGGG 159
>04_04_1416 -
33411900-33412148,33412735-33412854,33412986-33413235,
33413998-33414131
Length = 250
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 93 HGSGMHNRSGVHNGRGVHKGTCGVGQRGG 179
HG G H+ SG H G G G G G GG
Sbjct: 221 HGGGGHHFSGDHGGGGGCGGGGGCGGGGG 249
>07_03_0563 -
19542116-19542217,19542631-19542712,19543823-19544595,
19545207-19545296,19545612-19545689,19546112-19546207,
19546285-19546365,19546587-19546787,19546875-19546967,
19547052-19547116,19547684-19547715,19548844-19548956
Length = 601
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +3
Query: 96 GSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
G H G +N R G G G GG G +N G G
Sbjct: 487 GGNKHKNGGRNNNRNSTSGRNGGGGNGGHPGEQNNDGSG 525
>07_03_0559 + 19475893-19476783
Length = 296
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
G G G+ G G G G G G +GG FG VG G
Sbjct: 114 GAGGGLGGGGGGGFGGGSGGGVGGGGGQGGGFGAGGGVGGG 154
>07_03_0177 - 14770777-14772045
Length = 422
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 87 VGHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
+G G G+ G+ G G+ G G GG FG +G G
Sbjct: 303 LGGGGGLGGGGGLGGGSGLGGGIGKGGGLGGSFGKGGGLGGG 344
>05_06_0052 + 25199253-25199304,25199676-25199949,25200709-25201069
Length = 228
Score = 27.9 bits (59), Expect = 4.6
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
G G+GM + G GV G G G G G + VG G
Sbjct: 110 GVGTGMGTGTSTGTGTGVGTGGTGTGGAGVGAGTGTGVGTG 150
>02_05_0149 + 26290236-26290880
Length = 214
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
G G G G G G H G G G GG G N G G
Sbjct: 108 GGGGGSGRAYGFGGGYGGHPGGFGGGGGGGGGGGGRNYGGG 148
>01_06_0430 +
29299970-29300031,29300162-29300294,29301057-29301160,
29302201-29302372,29302488-29302628,29302707-29303055,
29303133-29305477
Length = 1101
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 389 SFAYDVQDSLTG--DSKTQHETRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGFNA 228
S +D Q+ G S + D DV G +++DP +K T + T + H GF++
Sbjct: 558 STIWDSQNDKAGPDSSAVVFDQYDSDV--GEENLLDPFSSKHTEEPTVEDHKGFSS 611
>10_08_0217 - 15962192-15962884
Length = 230
Score = 27.5 bits (58), Expect = 6.1
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTC--GVGQRGGDFGNFSNVGEG 212
G+GSG + G G G H G G GQ GG G + N G G
Sbjct: 128 GYGSGSGSGYGQAGGYGPHGGAYAQGGGQGGGGGGGY-NGGSG 169
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGV-GQRGGDFGNFSNVGEG 212
G+GSG + G G G H G G +GG G +N G G
Sbjct: 87 GYGSGSGSGYGQAGGYGSHGGAYAQGGGQGGGGGGGANGGSG 128
>12_01_0840 -
7847239-7847531,7847576-7847675,7848312-7848388,
7848486-7848738
Length = 240
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCG--VGQRGGDFGNFSNVGEG 212
G G+G SG +G G G CG GQ GG G G G
Sbjct: 158 GGGNGSGYGSGYGSGYGQGGGVCGGSYGQGGGGGGGGGGQGGG 200
>09_04_0179 - 15366119-15366916
Length = 265
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
GHGSG SG G G KG+ G +GN S G G
Sbjct: 218 GHGSGHGQGSGSGYGEGYGKGS------GNGYGNGSGSGYG 252
>06_02_0120 + 12055076-12055175,12055322-12055725
Length = 167
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGG 179
G+G G SG G G G+ G GQ GG
Sbjct: 136 GYGGGYGGGSGYGGGGGYGGGSGGGGQHGG 165
>05_06_0005 + 24802843-24803101,24804086-24804333,24804417-24804572,
24804956-24805114,24805862-24805929,24806044-24806433,
24806515-24806563,24806636-24806788,24807416-24807589,
24808207-24808362,24808705-24808756,24808830-24808988,
24809058-24809094,24809218-24809252,24809349-24809400,
24809614-24809663,24810590-24811924,24812688-24812825,
24812907-24812957,24813081-24814237
Length = 1625
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGE 209
G+G G R GRG + G G GG + N + GE
Sbjct: 1336 GYGRGGFGRGNRGRGRGRNFGDSGSSWSGGSYRNDESRGE 1375
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 84 RVGHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDF 185
R G G G R GRG +G G G RG F
Sbjct: 676 RGGRGDGSRGRGDRGRGRGFGRGDRGHGGRGTPF 709
>04_04_1158 -
31342934-31343272,31343508-31343658,31343745-31343976,
31344173-31344284,31344572-31344690,31344772-31344936,
31345049-31345247,31345351-31345733,31345838-31345902,
31346003-31346047,31346402-31346467,31346707-31346778,
31346907-31346981,31347086-31347157,31347255-31347326,
31347954-31348022,31348109-31348180,31348280-31348351,
31348756-31348827,31349295-31349366,31349528-31349711,
31350082-31350220
Length = 948
Score = 27.1 bits (57), Expect = 8.1
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 291 NDGVGALNDVAIAGLVLSLRVTS*TVLHVVSEAVLRM-SVVFLDFSDRGDSGNFGEW 458
+D + +++ A L L L ++ + V EA+L + S+ FLDFS SGNF W
Sbjct: 283 SDNLASIDFSKFASLKL-LDLSFNNITGQVPEAMLGLNSLNFLDFSYNQLSGNFPSW 338
>03_02_0765 + 11000724-11002496
Length = 590
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +3
Query: 90 GHGSGMHNRSGVHNGRGVHKGTCGVGQRGGDFGNFSNVGEG 212
G G G G G G+ G G + GG FG + G G
Sbjct: 447 GAGGGGGLGGGAGGGGGLDGGAGGGAEAGGGFGGGAGAGTG 487
>01_01_1069 -
8420454-8420670,8421272-8421447,8421556-8421738,
8421885-8421980,8422064-8422192,8422266-8422445,
8422524-8422634,8422714-8422869,8422983-8423078,
8423160-8423327,8423402-8423642,8423724-8423851,
8424042-8424134,8424214-8424309,8424431-8424523,
8424741-8424850,8424999-8425134,8425215-8425315,
8426029-8426152,8426237-8426411,8426523-8426681,
8427423-8427536,8427669-8427848,8428926-8429005
Length = 1113
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -3
Query: 290 DPDGTKRTVDYTADPHNGFNAVVHKEPLAHVAKVAKIAAPLT 165
+PD D+T P NG A PLA V K PLT
Sbjct: 192 NPDIKTLFTDHTCTPPNGARASPVSVPLAAVPKAGGTYPPLT 233
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,605,042
Number of Sequences: 37544
Number of extensions: 145243
Number of successful extensions: 800
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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